Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02190 ATGGCGGTGGCACGTGCGGTACCAGTGTTAGCCGTAGCAACAAGACCCTCAACGGTGTTTACCGGCGTTGCACAAACTCAAAGATTTCTCAAATTTAAACCTAAGTGTTATTCATCTACACCTTCTTCTTCTTCTTCTTCTTCTTCTAGAAAACTCATCCTTTACTCAAAACCTGGTTGCTGTTTATGCGATGGCCTCAAAGAGAAGCTTCAATCTGCATTCTTGCTTTCTGCTCCTCATTCCCTTAGCGACGTTGATTTACATATAAGAGATATAACTACCAATCCTGAATGGGAAAAAGCTTATCAATATGAAATACCTGTGTTGGCTAAAGTTCTCTCTGATGGCACTGAGGAAATTTTACCGCGATTGTCTCCTCGTTTAGGAGTGGAGCTCCTCCAGAAGAAGATAGCTGCTGCCTTGGGAGAACAATAA 435 0.4253 MAVARAVPVLAVATRPSTVFTGVAQTQRFLKFKPKCYSSTPSSSSSSSSRKLILYSKPGCCLCDGLKEKLQSAFLLSAPHSLSDVDLHIRDITTNPEWEKAYQYEIPVLAKVLSDGTEEILPRLSPRLGVELLQKKIAAALGEQ 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02190 144 SUPERFAMILY Thioredoxin-like 46 124 IPR036249 -
Trre5g02190 144 Pfam Glutaredoxin-like domain (DUF836) 51 137 IPR008554 -
Trre5g02190 144 PANTHER GLUTAREDOXIN-LIKE PROTEIN C5ORF63 HOMOLOG 21 141 - -
Trre5g02190 144 Gene3D Glutaredoxin 44 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02190 Trre-Chr5 16480632 16482887 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02190 - - cave:132167860 179.104
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02190 5 16480632 16482887 Trre5g02190 5 16480632 16482887 ECH