Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02181 ATGGCAGAAGAAGATGTACAGAAGAAGAATGACGATGATGTTCAGTCTCAGATTCAAACTGCTATGCGCTCTCGCGTCCCTCACTTCAAGCAACAAGCCGATTCTTTGACATTTGAAGGTGTTCGTAGATTGCTCGAGAAAGACTTAGGTTTTGAACAGTTTTCTTTGGATTCTCACAAAAGATTTATTAAGGATTGTTTGAAAGAGTGCTTACAAGAGGGTGGTGATGATGATGCCCCAAAGGTGTCGGGCGAGGAAGGGGAAAAAGGCGAAAGTACACAAGAGACAGAAGGACAAAAGGAGGAACTTCAATCTAAAGATGAAAAGGATCTCCCTGAAGATAAGGAGAAAATGGAAGATTCTCCAGTATTAGGCCTGCTTAAAGAACAAAAGGATGTTAAACAAGAAACCAAGAAAGAAGAGGGCAATGGGAAAAAAATAGTCCCGAGTGAGAACCTAATTAAGAAAGCTATTAGAAAAAGATCTTCATACCTCAAGGCTAATGCAGAAAAAGTCACTTATGGTAGTCTTCGCCGACTATTGGAGGAAGATCTTAAACTTGATAAATTTACTCTGGATCCCTATAAGAAGTTTATAAATAAAGAACTTGATGAGGTATTAACACCTTCTGAAGTTGTGGAACCTGCAAAAAGTGCTAAGAAAATTGTTAAGAAGAAACCTGATACCAAAGTAACTAAAAAGCTCAGTACTGAAGAGAACTCTGATAATTCAGATGATGCGAGTGAAGAGGAAGAGAGTGAGGAAGATGAAGTTAAACCTAGAAGAAAAATTGTTCCAAAAGGCAAGATGCAGACTCCCGTTGGACCCAAAAAGCGTAAAGGAGATGAGACCAATCTACCCAGCAAGAAAAGGGTCAAGCCTGATAAAGCAGCTGCAGAAGATAATAGTGATGCAGAAGATGATGGAAAAAACTCTGAAGATGATCAGTCCCAATCATCAGCAGAGAATACTACTAAGAAGAAACAAGTTTCAACTCCTGTGTACAGTAAACGTGTGGAGCACTTGAAATCTGTTATTAAAGCATGTGGCATGAGCATTCCTCCCGTTATTTATAAAAAAGTCAAGCAGGTTCCTGAAAACAAACGGGATGGACAACTAATTAAAGAGTTGGAGGAAATACTATCTAGAGAAGGCTTGCCTCCAAACCCATCAGAAAAGGAAATCAAAGACACAAATAGGAAGAAGGCGAGAGCCAAGGAACTTGAGGGTATTGATATGAGTAATATTGTGTCAAGTACACGTAGAAGGGCATCAATTAGTTTTGCAGCTCCTCCACCACCAAAGCCTAAGATTCCAGCGGAAACTAGTGGCAAAGATACCAAAGGTAGTGATAATGACAACGATGATGAAGGCAATGATAATGAAGAGGATGAAGAAGATGAAGAAGAGGAGGAGGATAGTAGTGATGATGATGATGGAAGTGAGAGTGAAGAATTTAATGAAGATGAAGAGGACAGTGATTGA 1485 0.396 MAEEDVQKKNDDDVQSQIQTAMRSRVPHFKQQADSLTFEGVRRLLEKDLGFEQFSLDSHKRFIKDCLKECLQEGGDDDAPKVSGEEGEKGESTQETEGQKEELQSKDEKDLPEDKEKMEDSPVLGLLKEQKDVKQETKKEEGNGKKIVPSENLIKKAIRKRSSYLKANAEKVTYGSLRRLLEEDLKLDKFTLDPYKKFINKELDEVLTPSEVVEPAKSAKKIVKKKPDTKVTKKLSTEENSDNSDDASEEEESEEDEVKPRRKIVPKGKMQTPVGPKKRKGDETNLPSKKRVKPDKAAAEDNSDAEDDGKNSEDDQSQSSAENTTKKKQVSTPVYSKRVEHLKSVIKACGMSIPPVIYKKVKQVPENKRDGQLIKELEEILSREGLPPNPSEKEIKDTNRKKARAKELEGIDMSNIVSSTRRRASISFAAPPPPKPKIPAETSGKDTKGSDNDNDDEGNDNEEDEEDEEEEEDSSDDDDGSESEEFNEDEEDSD 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02181 494 MobiDBLite consensus disorder prediction 1 33 - -
Trre5g02181 494 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 148 208 IPR014876 -
Trre5g02181 494 PANTHER HIRA-INTERACTING PROTEIN 3 1 493 IPR037647 -
Trre5g02181 494 MobiDBLite consensus disorder prediction 389 409 - -
Trre5g02181 494 MobiDBLite consensus disorder prediction 213 337 - -
Trre5g02181 494 SMART CHZ_2 402 437 IPR019098 -
Trre5g02181 494 MobiDBLite consensus disorder prediction 381 494 - -
Trre5g02181 494 MobiDBLite consensus disorder prediction 455 494 - -
Trre5g02181 494 MobiDBLite consensus disorder prediction 73 149 - -
Trre5g02181 494 MobiDBLite consensus disorder prediction 275 305 - -
Trre5g02181 494 Pfam Histone chaperone domain CHZ 404 432 IPR019098 -
Trre5g02181 494 MobiDBLite consensus disorder prediction 316 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02181 Trre-Chr5 16389817 16394123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02181 8 85 EF-hand Containing Proteins AT1G44780 42.308 2.41e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02181 - - psat:127084081 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02181 5 16389817 16394123 Trre5g02181 5 16389817 16394123 ECH