Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02174 ATGCCAAGTTCTTCTTCATCTTCATTTTTGAGACAGTTAAGTTCTAAAGAAACTTGGAAATCAACATCAAATAGGTGGAGTAGTAGTAAAAATACATACAACAACAATAGTTTAGGACTTTCTTGTGACACAAATCTCAATCAAATGGAAGGTTTTAACATTAACATGTATGGAAATGATGAGAGTAGTGGTATTATGGTAAGGAAAAGAGTTATGGTTATTGTTGATGGAACTTCTCATTCTAAACATGCAATGATTTGGGCTCTTACTCATGTTGTTAATAAGGGTGATTTGTTAACTTTGCTTCACATTGTTTCTCCACAAACTGCTTCTGAATCTTATTCTTCTACTTATCTTGTTAATCATCTTGGTTCTCTTTGCAAAGATTGCAAGCCAGAGGTTGAAGTTGAAGCACTTGTAATTCAAGGACCAAAACTTGCCACAGTGATGAGCCAAGTTAAGAAATTGGAGGCCTCTATCTTGGTACTAGGCCAAAAGAAGCCATCTTCTCTCTTTAGCTGTCTTTGTGGAAGTGGTAGCAGCTGCAGCAGCACAGAAGAGTTTGTGGAGTATTGTATCAATAATGCAGAGTGTTTGACAATAGGAGTAAGGAAGAGAAGCAAGGGCAATAATGGCTACCTAATCAGCACCAGGTGGCAGAAGAACTTCTGGCTTTTGGCTTAG 684 0.3757 MPSSSSSSFLRQLSSKETWKSTSNRWSSSKNTYNNNSLGLSCDTNLNQMEGFNINMYGNDESSGIMVRKRVMVIVDGTSHSKHAMIWALTHVVNKGDLLTLLHIVSPQTASESYSSTYLVNHLGSLCKDCKPEVEVEALVIQGPKLATVMSQVKKLEASILVLGQKKPSSLFSCLCGSGSSCSSTEEFVEYCINNAECLTIGVRKRSKGNNGYLISTRWQKNFWLLA 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02174 227 Pfam Universal stress protein family 69 198 IPR006016 -
Trre5g02174 227 Gene3D HUPs 66 212 IPR014729 -
Trre5g02174 227 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 69 179 - -
Trre5g02174 227 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 5 227 - -
Trre5g02174 227 CDD USP_Like 70 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02174 Trre-Chr5 16336112 16338305 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02174 - - mtr:11418006 394.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02174 5 16336112 16338305 Trre5g02174 5 16336112 16338305 ECH