Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02173 ATGGAAGAAACCTTTGTTTTCCAATGGACTGTAATCAGATCTCTATTATCTATCCTTCAATGGTGGACTTTCAATGTCACCGTTATCATCATCAACAAATGGATCTTCCAGAAATTAGATTTCAAGTTTCCCCTATCAGTATCCTGTGTCCACTTTATCATCTCAGCCATTGGAGCATATGTAGTAATTAAGGTGTTGAAGCTTAAACCACTGATAACTGTTAACCCTGAAGATCGCTTGAAAAGAATCTTTCCGATGTCATTGGTGTTCTGTATTAACATAGTGCTGGGGAACGTGAGCCTACGATACATTCCAGTTTCGTTTATGCAGACAATAAAGTCATTCACACCTGCAACCACAGTTGTTTTGCAATGGCTAGTGTGGAGGAAGCATTTTGATTGGCGTATTTGGGCCTCTCTTATACCCATTGTTGGTGGGATTCTTCTCACATCTGTTACAGAGATGAGCTTTAATATGTTTGGATTTTGTGCTGCCTTATTCGGCTGTTTGGCTACATCTACAAAGACTATCCTTGCAGAATCTCTTCTCCATGGATACAAATTTGACAGCATAAACACGGTTTATTACATGGCTCCTTATGCGACCATGATATTGGTGCTTCCTGCCATGGTACTTGAAGGAAATGGAGTTCTTGAATGGCTAAATACTCATCCATATCCTTGGACGGCCCTCATCATTATTTTTAGTTCTGGGGTGTTGGCTTTCTGTCTTAACTTCTCCATTTTTTATGTGATCCACTCCACCACTGCTGTAACATTTAACGTCGCTGGGAACCTTAAGGTTGCAGTTGCTGTCCTTGTTTCTTGGCTGATATTTAGGAACCCAATTTCATATTTAAATGCTGTTGGATGTGCCATCACTCTTGTGGGTTGTACATTCTATGGTTATATTAGGCACTTGCTCTCTCAACAGCCATCAGTTCCGGGAACTCCTCGAACACCAAGAACACCAAGAACCCCTCGGAGTAAAATGGAGTCACTTCCACTTGTAAATGATAAATTAGAAAATAAGGTCTAA 1038 0.4046 MEETFVFQWTVIRSLLSILQWWTFNVTVIIINKWIFQKLDFKFPLSVSCVHFIISAIGAYVVIKVLKLKPLITVNPEDRLKRIFPMSLVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVVLQWLVWRKHFDWRIWASLIPIVGGILLTSVTEMSFNMFGFCAALFGCLATSTKTILAESLLHGYKFDSINTVYYMAPYATMILVLPAMVLEGNGVLEWLNTHPYPWTALIIIFSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVLVSWLIFRNPISYLNAVGCAITLVGCTFYGYIRHLLSQQPSVPGTPRTPRTPRTPRSKMESLPLVNDKLENKV 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02173 345 Gene3D - 49 158 - -
Trre5g02173 345 MobiDBLite consensus disorder prediction 312 345 - -
Trre5g02173 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 220 300 - -
Trre5g02173 345 PANTHER SOLUTE CARRIER FAMILY 35 15 305 - -
Trre5g02173 345 Pfam Triose-phosphate Transporter family 15 301 IPR004853 -
Trre5g02173 345 FunFam UDP-galactose transporter 1-like 47 158 - -
Trre5g02173 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 69 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02173 Trre-Chr5 16330268 16335132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g02173 1 345 Organic Solute Cotransporters AT1G77610 85.549 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02173 K26222 - gmx:100809511 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02173 5 16330268 16335132 Trre5g02173 5 16330268 16335132 ECH