Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02170 ATGGACTCATCCACTTTCTCCAATTTCAGACCCTCTTCTCATTCAATTCCTCTCTCACAACAACCTTATCATCGTCTTCAATTCTCTCCTCATCAATTTCTGAAATTTAAACGGTTGGGTTTGGTTAAGAATCGCTTAATTGCTCGTTCTACTTCTTCTGGTTCTGATCAATCTGATGCTGGTGGTTCTCTTAATGGAATTCAGTTAACACCCAATAAGCTTTTTTTGCAGGAGGCTATTGGGGCTGAATATGGAGAAGGCTTTGAGACTTTTAGGGCAGATGGACCATTAAAAGTTGATGTGGACTATTTGAATGATAAGTTACAAGATGGTATTCTTCAACGCATACGTTATGCTATGAAGCCGGATGAGGCTTATGGTCTTATCTTCTCTTGGGACAATGTGGTGGCTGATACTCGAGCTCTGAAGAGGAAGGCATGGAACCAGCTGGCCTCTGAAGAAGGAAAGGATATTCCTGAAGATGGTGATATTGAAAAGTTAATGCTTAATGCAGGTGCTGATCATGTATTAAATAAGCTTTTTCTCTCTGATAAGGAAGAAAGTAAGCTGGATAGACTGAAGTTGAGGTTTTCTCAAATATATTATGATAATCTTCTGAAAGTTGAAAGACCAATGGAGGGCTTGAAAGACTGGTTGGAAGCAGTTTATACAGCTCGCATCCCCTGTGCTGTTGTTTCAAGTCTTGATAGAAAACATATGGTAGAAGCTTTGCAACAAATGGGACTCGATAAGTACTTTCAGGCAATTGTGACAGAGGAGGATGGGATGGAGTCAATAGCTCATAGATTCCTTTCTGCGGCTGTCAAGCTTGACCGGAAACCTTCCAAGTGTGTGGTTTTTGAAGATGATCCTCGAGGAGTAACTGCTGCGCACAATTGCACAATGATGGCTGTAGCATTGATTGGAGCTTATCGCGCGTATGATTTAGAACAAGCTGATCTTGCTGTTGCTAACTTCAGTGAACTTTCTGTAATCAACCTGAGGAGACTATTTGCCAACAAGGGCTCTACATTTATGGACTTGCAGAAGCAGATTATAGATAAAACTCCTCCTAAAAGGAGACTTGGAATAGACACCATTTTCTAA 1107 0.4083 MDSSTFSNFRPSSHSIPLSQQPYHRLQFSPHQFLKFKRLGLVKNRLIARSTSSGSDQSDAGGSLNGIQLTPNKLFLQEAIGAEYGEGFETFRADGPLKVDVDYLNDKLQDGILQRIRYAMKPDEAYGLIFSWDNVVADTRALKRKAWNQLASEEGKDIPEDGDIEKLMLNAGADHVLNKLFLSDKEESKLDRLKLRFSQIYYDNLLKVERPMEGLKDWLEAVYTARIPCAVVSSLDRKHMVEALQQMGLDKYFQAIVTEEDGMESIAHRFLSAAVKLDRKPSKCVVFEDDPRGVTAAHNCTMMAVALIGAYRAYDLEQADLAVANFSELSVINLRRLFANKGSTFMDLQKQIIDKTPPKRRLGIDTIF 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02170 368 CDD HAD_BPGM-like 127 309 - -
Trre5g02170 368 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 7 368 - -
Trre5g02170 368 Pfam Haloacid dehalogenase-like hydrolase 128 306 IPR041492 -
Trre5g02170 368 Gene3D Putative phosphatase; domain 2 138 211 IPR023198 -
Trre5g02170 368 Gene3D - 128 324 IPR023214 -
Trre5g02170 368 SUPERFAMILY HAD-like 101 329 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02170 Trre-Chr5 16299490 16302960 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02170 - - mtr:11408335 626.706