Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02165 ATGGAGGCAGTTCAGTCATGGGTTTCAAAAAACAAACTCGCCAGCGTTGGGGCATTGTGGGCTTCTGGAATTGGAGCAACACTTGTAGCTTATTCAAGAGCAAAATCTCCAATGAAGCCAAGTCTAAGGCTTATCCATGCTAGGATGCACGCACAGGCGCTAACTCTAGCAGTACTATCGGGTGCAGCTGCTTATCACTATTATGAGATTAATCGTGATGATATTCATCATCATCAAATACCAGTAGAAGATAACTCTGCTCCAATTGTTACTAACCTAGTTGAATGGGAGCTCCACACTAACAGTCCATTTTAA 315 0.4286 MEAVQSWVSKNKLASVGALWASGIGATLVAYSRAKSPMKPSLRLIHARMHAQALTLAVLSGAAAYHYYEINRDDIHHHQIPVEDNSAPIVTNLVEWELHTNSPF 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02165 104 Pfam Hypoxia induced protein conserved region 11 61 IPR007667 -
Trre5g02165 104 Gene3D - 13 72 - -
Trre5g02165 104 PANTHER RESPIRATORY SUPERCOMPLEX FACTOR 2, MITOCHONDRIAL 1 78 IPR040153 -
Trre5g02165 104 ProSiteProfiles HIG1 domain profile. 1 77 IPR007667 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02165 Trre-Chr5 16243309 16244052 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02165 - - tpra:123894858 195.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02165 5 16243309 16244052 Trre5g02165 5 16243309 16244052 ECH