Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02162 ATGCGCAACTTAGCAGCTCAATTCTCTAACTATTTATTTAGAAGAAGAATTGCGATTAATCAACAGTCTCGTAATTTTTCATCTTCCAGTAGCAAAGAGGAACTACTCTTGGAGCATGAAGTTGAGAGAAAATTTGGGTGGTTATTGAAGAGTCTATTTTTCGGGTCTGCACTTTATGCGGGATACCAGTTCTTTCCTTATATAGGGGAAAATTTGATGCAACAGTCGGTATCTCTTTTGCGTGTCAAGGATCCCTTGTTCAAAAGGATGGGAGCTTCTAGATTGGCCCGTTTTGCGAAAGATGATGAAAGCAGGATGAAGATAGTTGAGTTGGGCGGAGATAAAGAGCTCATAAATATGTTAAGCACGGCTAAAGACGACCGTACACGGAAAGCAGCACTGAACGCTCTGGCTAAGCTGTCACACTCAGGTTGA 435 0.4184 MRNLAAQFSNYLFRRRIAINQQSRNFSSSSSKEELLLEHEVERKFGWLLKSLFFGSALYAGYQFFPYIGENLMQQSVSLLRVKDPLFKRMGASRLARFAKDDESRMKIVELGGDKELINMLSTAKDDRTRKAALNALAKLSHSG 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02162 144 Gene3D - 3 144 IPR011989 -
Trre5g02162 144 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 1 143 - -
Trre5g02162 144 SUPERFAMILY ARM repeat 72 142 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02162 Trre-Chr5 16230509 16232080 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02162 - - gmx:100527372 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02162 5 16230509 16232080 Trre5g02162 5 16230509 16232080 ECH