Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02152 ATGGCAAAATCATATGAATCCGTACTTAGAAATCAATTATCGCGGATTGTATCATCTATGAAACCCCATAGACCCAAAACAAACCAACCCGTATCACCGAACCGGGTCACCACTCCACGAACCACGAAACAAGACGCCACTGTTAAGGTGGAACCGCAGAAGAAGGTGGAGCCTGTTGAAACTCGTAAACCCCTTTCCAAGGTGGTCGCTGATTGCACTAAACGGTGGTTTCAGGAAACGCTTAAGGAGGCCAAAGGTGGAGATAGCTCCATGCAACTTCTTGTTGGTCAAATGTATTATTCTGGCTATGGTGTTCCCAAAGATCCTCAAAAGGGACATGCTTGGATTAGTAAAGCATCAAGAAGTCGAAATTCAGTTTGGCAAGTAAGCGAAAAACAACCAGGTTACAAAGCAAGTGATTCGGATTCATCTGAACAGGAGAACAAATCTACTCCTTAA 459 0.4401 MAKSYESVLRNQLSRIVSSMKPHRPKTNQPVSPNRVTTPRTTKQDATVKVEPQKKVEPVETRKPLSKVVADCTKRWFQETLKEAKGGDSSMQLLVGQMYYSGYGVPKDPQKGHAWISKASRSRNSVWQVSEKQPGYKASDSDSSEQENKSTP 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02152 152 SMART sel1 89 124 IPR006597 -
Trre5g02152 152 MobiDBLite consensus disorder prediction 47 63 - -
Trre5g02152 152 Gene3D Tetratricopeptide repeat domain 65 139 IPR011990 GO:0005515
Trre5g02152 152 MobiDBLite consensus disorder prediction 15 63 - -
Trre5g02152 152 MobiDBLite consensus disorder prediction 15 46 - -
Trre5g02152 152 MobiDBLite consensus disorder prediction 117 152 - -
Trre5g02152 152 SUPERFAMILY HCP-like 83 122 - -
Trre5g02152 152 MobiDBLite consensus disorder prediction 106 152 - -
Trre5g02152 152 PANTHER EXPRESSED PROTEIN 2 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02152 Trre-Chr5 16136133 16137827 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02152 - - gmx:100811436 192.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02152 5 16136133 16137827 Trre5g02152 5 16136133 16137827 ECH