Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02148 ATGTCTCAAACTCTCAAAATTGGCATAGTTGGGTTTGGCACCTTTGGCCAATTTCTTGCAAACACAATGATAAAACAAGGCCATACTCTATTTGCAACTTCTAGAACTGATTATTCTCAACTTTGTCTCCAAATGGGTATCCATTTCTTCAGGGATATAACAGCATTCCTTGATGCTGACATGGATGTCATACTGCTATGTACATCTATTTCATCACTATCAGAAGTTGTTGGATCAATGCCACTCACTTGTCTGAAACGACCAACACTTTTTGTTGATGTTCTTTCAGTTAAAGAGCACCCAAAGAACCTTCTTTTAAGAGTGCTACCTGAGGAGTCAGACATACTTTGCACACATCCAATGTTTGGACCAGTGAGTGGGAAAAATGGCTGGCAAAATCTGACTTTCATGTTTGATAAAGTTCGAATTAAGGATGAAGTTACATGCTCTAAATTTCTCCATATTTTTCAAAGTGAGGGTTGCAAGATGGTAGAGATGTCATGTGAGGAACATGACAAAGCAGCTGCAAAGAGTCAATTTATCACACATACAATAGGCAGGACATTGGCAGAAATGGATATTAAATCCACTCCTATCGACACCAAGGGCTTTCAAACACTTATTGAGTTGAAAAAACCAGTCATGGGGTGTAGTTTTGATCTGTATAGTGGATTATTCGTATACAACAGATTCGCCAGACAAGAGCTGGAAAACCTTGAACATGCCCTACAAAAAGTCAAAGAGACGCTGCTCCAAAGAATTGAGGAAGGACAGAACCCAGAAAGAACTGAAAGTTGA 798 0.3922 MSQTLKIGIVGFGTFGQFLANTMIKQGHTLFATSRTDYSQLCLQMGIHFFRDITAFLDADMDVILLCTSISSLSEVVGSMPLTCLKRPTLFVDVLSVKEHPKNLLLRVLPEESDILCTHPMFGPVSGKNGWQNLTFMFDKVRIKDEVTCSKFLHIFQSEGCKMVEMSCEEHDKAAAKSQFITHTIGRTLAEMDIKSTPIDTKGFQTLIELKKPVMGCSFDLYSGLFVYNRFARQELENLEHALQKVKETLLQRIEEGQNPERTES 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02148 265 ProSiteProfiles Prephenate/arogenate dehydrogenase domain profile. 5 265 IPR003099 GO:0004665|GO:0006571|GO:0008977
Trre5g02148 265 Coils Coil 229 256 - -
Trre5g02148 265 SUPERFAMILY 6-phosphogluconate dehydrogenase C-terminal domain-like 167 251 IPR008927 -
Trre5g02148 265 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 4 166 IPR036291 -
Trre5g02148 265 Gene3D - 1 172 - -
Trre5g02148 265 Pfam Prephenate dehydrogenase, nucleotide-binding domain 45 129 IPR046826 GO:0070403
Trre5g02148 265 PANTHER AROGENATE DEHYDROGENASE-RELATED 2 258 IPR045011 GO:0006571|GO:0033730
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02148 Trre-Chr5 16124537 16126658 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02148 K15227 - gmx:100787362 427.557
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02148 5 16124537 16126658 Trre5g02148 5 16124537 16126658 ECH