Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02147 ATGAAGCCCAATACTCAGGCTTTCGCCACTGGCCCGCCGCACGTGACTTCTTTTCACCGCGCAACTGTCACACGTGCCGCGCTTTCTGAGACTTATCTTCCTTCGCCGAACCAAAAACTCCGACAATTCCGGACAGCCAAACGCCGCCGTGTCAACCTCTCCCTCCACCGCTCCAGTCGCATAATCGCGGCTGTAAACGATGACGACGTGACAGAAACCTTAGTTGAACGCGCGGAGTCTAAAGAATGGTCTCGAGCACGAAGCAACCGGCGCGGCGTGTTGATGGCGCCGTTTTTAGCAGCGGGAGCTTCGTTTCTTCTCTCCGCGACGACGACGAGGGCGGCGGAGGAGGAGAAAGTGACGCCGGTGGAAGTTACGGCTGTGAAACCAGAGGAGGTGAAGAAGATAGAAGAGGAAGTGATAACTTCGAGGATTTACGATGCGACGGCGATAGGTGAACCGTTGGCGATAGGGAAAGAGAAAGGGAAAGTTTGGGAGAAGATGATGAATGCTAGAGTTGTTTATTTAGGAGAAGCTGAACAAGTTCCGGTTCGTGATGATAAGGAATTGGAGCTTGAGATTGTGAAGAATTTGCATAAGCGTTGTGTTGATATTGATAAGCGTTTATCTTTGGCTATTGAAGCTTTTCCCTCTGATCTTCAAGAACCACTCAATCAGTATATGGATAAAAAGATAAATGGAGAAACCTTAAAGACTTATACGGCGCATTGGCCGCCTGAACGATGGCAGGAGTATGAACCTATTCTTAGTTACTGCCGTGAAAATGGAATTCGTCTTATTGCTTGCGGTACTCCACTGAAGATCTTAAGGACTGTCCAAGCAGAAGGAATTAGTGGGCTAACAAAGGCTGAGCGTAAATTATATACACCTCCAGCTGGTTCAGGCTTCATATCAGGCTTTAATTCTATGTCACGTAGATCTTCAGTTGATAGTACTCCAAATTTGTCATTTCCTTTTGGTCCAAGCTCATATCTATCTGCACAGGCTAGAGTAGTTGACGAGTATACCATGTCCCAGATCATCTTACGCAATATGTCTGATGGAGGGGCAACCGGCTTGTTGATAGTTGTGACCGGTGCAAGCCATGTCACATATGGATCTAGAGGAACGGGAGTGCCTGCAAGAATTTCGAGAAAATTACAAAAGAAAAATCAAGTAGTTATATTACTTGACCCAGAAAGACAGTTCATTCGCCGTGAGGGAGAAGTTCCTGTTGCTGATTTTTTGTGGTATTCTGCTGCCAGACCCTGTAGCAGAAATTGCTTTGACAGGGTTGAGATTGCTCGGGTTATGAATGCTGCTGGTCAGAGGCGAGATGCCCTCCCACAGGATCTTCAAAAGGGAATTGATCTTGGTTTAGTATCACCAGAGGTATTGCAGAACTTCTTTGATCTAGAGAAATATCCCCTGCTTTCAGAACTCAGTCACCGTTTCCAGGGTTTCAGGGAAAGACTGTTGGCCGATCCCAAATTCTTAAATAGACTAGCCATAGAAGAAGGAATATCAATAACAACTACATTATTAGCACAATATCAAAAGCGGAAAGAAAACTTCTTTCAAGAGCTTGACTATGTTATTACGGACACTGTCAGAGGATCAGTTGTTGATTTCTTTACAGTGTGGCTTCCTGCACCGACTTTATCATTCCTTTCCTATTCTGATGAGATGAATTCGCCTGATAACATTAGTTCTCTATTAGGACTTCTTGGCTCCATCCCAGACAATGCATTTCAAAAGAATCCAGTGGGTACGAATTGGAATCTCAATCATCGAGTTGCATCAGTTGTATTTGGTGGTCTAAAACTCGCTGGTGTTGGATTTATTTCAAGTATTGGAGCTGTGGCTTCATCAAATTCACTGTTTGCAGTTCGTAAATTGCTTAATCCATCAATCGTCACTAACCAACAGATTGCAAGGTCACCAATACTCAAAACAGCAATTGTTTATGCATGCTTTCTTGGAATATCTGCAAATCTCCGTTATCAGATAATTGCTGGAGTAGTGGAGCATCGGATTTCTGATCAGTTTGCTTCCCAAACATTTCTTGTAAATATGCTATCTTTTGTATCACGGACAATCAATTCTTACTGGGGAACACAGCAATGGATTGACCTTGCACTCTCAACCGGATTGCAAGTTAGAAAGACTGAGTCACCTGAGTTACCTACAACAGATGCAACAGATTCTCCGAATCAAGCTGTAATCTTATGCAATGAAACAGAAGAAGCCAGCATCGATGAGATTAAAAGTGAATGA 2277 0.4405 MKPNTQAFATGPPHVTSFHRATVTRAALSETYLPSPNQKLRQFRTAKRRRVNLSLHRSSRIIAAVNDDDVTETLVERAESKEWSRARSNRRGVLMAPFLAAGASFLLSATTTRAAEEEKVTPVEVTAVKPEEVKKIEEEVITSRIYDATAIGEPLAIGKEKGKVWEKMMNARVVYLGEAEQVPVRDDKELELEIVKNLHKRCVDIDKRLSLAIEAFPSDLQEPLNQYMDKKINGETLKTYTAHWPPERWQEYEPILSYCRENGIRLIACGTPLKILRTVQAEGISGLTKAERKLYTPPAGSGFISGFNSMSRRSSVDSTPNLSFPFGPSSYLSAQARVVDEYTMSQIILRNMSDGGATGLLIVVTGASHVTYGSRGTGVPARISRKLQKKNQVVILLDPERQFIRREGEVPVADFLWYSAARPCSRNCFDRVEIARVMNAAGQRRDALPQDLQKGIDLGLVSPEVLQNFFDLEKYPLLSELSHRFQGFRERLLADPKFLNRLAIEEGISITTTLLAQYQKRKENFFQELDYVITDTVRGSVVDFFTVWLPAPTLSFLSYSDEMNSPDNISSLLGLLGSIPDNAFQKNPVGTNWNLNHRVASVVFGGLKLAGVGFISSIGAVASSNSLFAVRKLLNPSIVTNQQIARSPILKTAIVYACFLGISANLRYQIIAGVVEHRISDQFASQTFLVNMLSFVSRTINSYWGTQQWIDLALSTGLQVRKTESPELPTTDATDSPNQAVILCNETEEASIDEIKSE 758
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02147 758 SUPERFAMILY EreA/ChaN-like 163 419 - -
Trre5g02147 758 CDD ChanN-like 172 396 IPR007314 -
Trre5g02147 758 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 32 757 - -
Trre5g02147 758 Pfam Protein RETICULATA-related 490 674 IPR021825 -
Trre5g02147 758 Pfam Haem-binding uptake, Tiki superfamily, ChaN 164 383 IPR007314 -
Trre5g02147 758 Gene3D - 143 422 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02147 Trre-Chr5 16116370 16123330 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02147 - - mtr:11418002 1277.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02147 5 16116370 16123330 Trre5g02147 5 16116370 16123330 ECH