Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02118 ATGGCGAACGTTGATGAACTCATATCTTCCATATTCTCAGATATCAACACTTACACCGGCAAAGACCCTCTTCTTCCTTGGCTCCGAGGAATCCGAAAATTGAAGGAAAATCTTCCCTCAAAAACCCTCAAGGAAAAACTACCAGAGTTCTTGCGGAAATGCACCCAAACATTCGAGCTCGATCGTCGTTACAGAAACGATTTGCGTTACCTTCGTGTTTGGCTCCACTTGATGGATTTTGTGGATGATCCAAGTGCATTGCTTAGAACTATGGAGGTTAATCAAATCGGAACAAAACGTTGTCAATTCTATCAAGCATATGCTCTTTACTATGAGAAGAGTAAGAATTATGATGAAGCAGAGAAAATGTATCATATGGGAGTTAAGAACCTTGCAGAACCTGTCGATGAATTGCAGAAATCTTATGAACAATTTCTCCAACGCATGAAACGCAAGAAAAAAATTCAGGAAATGAAAGCTGCTGATAGACGCGTAAAGGCTAAAAATGATGAGAGCAAGAGGTTTCGTGGTGATCATACAGTTGTAATCAACAAGTTTGTTGACACTGCCATGGATGGAAAGTCAGAAGCAGAAAATGCATGCCATCATGGACTAGTTGATCCTACAATAAATATGAAGGAGGCAATGAATGCAATTAACAGTATGTTCAGTGAGCCATTAGAGACTGTTCCTTTGGCTAGGAAATCACATAAAAACAATTCGAAAGAAAGTCGCAGTACACAGAACAACTTTGAAGTTTTTGTTGATGATAACTTGGACAATGAAATTAAACCAAGTGGTTCCTCATCGCTTCAGCAAAGGACTGAAGCTAGCAAACCTCAACAAGAGTCACTCCAGATATATATTGATGATGAAGGATGTTCAGAAGGTTCTACTTCATCAGCTCCAAAAACAAATGGCTTTGTTTTTCCACGACCTAAGGATGTTCGTTCTGAGAAATCTAGGGATATGGATGCGCAAAGGTGTGGTAATTCAAAGTTCAGAGAGGATACAGTTGTTCGCAGATTTGTTGGTTCTGCCATTTTGGATGAACCAAAGGTGGAGAATGCTTGTCACCACGGCTTAGTAGACCCCACAATCAACATGAAGGAAGCAATGAATGACATAAATAGCATGTTTGGGAAGCCGATAGATTTTGTTAGAAAAAAAAGATCAGTGAAGCAAGAGAAAGCACCGGAGACTAACAACGGAAAGGACTTTGGTGGGTTTTCAATCCTTGCTGATGATGATGATGACCTTCAACCGAAACGTCCTCCACTACCAAAACCGCTAGGAAAGTCAAAGGGATCAGATTTATTTGAGCCAACTCTCCACACAAAGGAAGCCATGGATGACATTAACAACATGTTTAATATGCCTTTGGATTTTTAG 1392 0.4009 MANVDELISSIFSDINTYTGKDPLLPWLRGIRKLKENLPSKTLKEKLPEFLRKCTQTFELDRRYRNDLRYLRVWLHLMDFVDDPSALLRTMEVNQIGTKRCQFYQAYALYYEKSKNYDEAEKMYHMGVKNLAEPVDELQKSYEQFLQRMKRKKKIQEMKAADRRVKAKNDESKRFRGDHTVVINKFVDTAMDGKSEAENACHHGLVDPTINMKEAMNAINSMFSEPLETVPLARKSHKNNSKESRSTQNNFEVFVDDNLDNEIKPSGSSSLQQRTEASKPQQESLQIYIDDEGCSEGSTSSAPKTNGFVFPRPKDVRSEKSRDMDAQRCGNSKFREDTVVRRFVGSAILDEPKVENACHHGLVDPTINMKEAMNDINSMFGKPIDFVRKKRSVKQEKAPETNNGKDFGGFSILADDDDDLQPKRPPLPKPLGKSKGSDLFEPTLHTKEAMDDINNMFNMPLDF 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02118 463 Pfam Mad3/BUB1 homology region 1 13 128 IPR013212 -
Trre5g02118 463 PANTHER MITOTIC CHECKPOINT SERINE/THREONINE-PROTEIN KINASE BUB1 9 463 IPR015661 GO:0007094
Trre5g02118 463 SMART mad3_bub1_i 4 128 IPR013212 -
Trre5g02118 463 Coils Coil 135 171 - -
Trre5g02118 463 MobiDBLite consensus disorder prediction 313 328 - -
Trre5g02118 463 ProSiteProfiles BUB1 N-terminal domain profile. 11 170 IPR013212 -
Trre5g02118 463 MobiDBLite consensus disorder prediction 262 285 - -
Trre5g02118 463 MobiDBLite consensus disorder prediction 262 328 - -
Trre5g02118 463 Gene3D - 10 167 - -
Trre5g02118 463 MobiDBLite consensus disorder prediction 391 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02118 Trre-Chr5 15800096 15802058 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02118 - - mtr:11414327 779.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02118 5 15800096 15802058 Trre5g02118 5 15800096 15802058 ECH