Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02100 ATGCTTTCAGGTTCAACTACTGGGAGCTACTTGGGACTTAGAGCTACAAACTTCCACAGAAGACCAATTCCAGGGTTGAGAGGAAATAAGCTTCAAATTTCTAGTGCAAGGTTCTGTCGGAAGTATAAAGTTTCCTGCAAACTTACTGAGTTAGGAAACGATTCATGTTCATCAAAGGAACTTGAAAAGATTAAACCTTTGGTTAAGATGTGCGGCATTACATCAGCTAAAGATGCTGCTATGGCGGCCGAAGCTGGTGCAAACTTTATTGGAATGATCATATGGCCGAACTCAAAACGTTCTGTTTCACTTTCTGTTGCAAAGGAGATATCAAAAGTTGCAAGAGATTATGGAGCAGATCCTGTTGGAGTATTTGTGGATGATGATGCAGAAGCAATACTAAGAGCTTCTGATGCAGCAAATCTTGAGTTTGTGCAGCTTCATGGGTCTGGTTCGCGGTCAGCTTTTCCATTTTTAATTCAGGAAAATCGTGTAATATATGTTCTCCATGCAAATGCGGATGGGAGCCTTTTAAACACAATTCCTGATGAAGAGTGTTCTCTAGTTGATTGGGTTTTGGTAGATAGCGCAAAAGGTGGCAGTGGCGAAGCATTCGACTGGGCCCAGTTTAAATTACCAAAAATTAGAAGCAAATATGGTTGGCTCTTAGCAGGAGGGATCAGTCCAAAGAATGTTTGTGAGGCTCTGTCTACTCTCAAACCTGAAGGGGTGGATGTCAGTAGCGGCATATGTGCATCAGATGGCATCCAGAAGGATAAATCAAGAATAGTTTCCTTCATGGATGCAGTACGTTCTGCTCAGTACTGA 828 0.4215 MLSGSTTGSYLGLRATNFHRRPIPGLRGNKLQISSARFCRKYKVSCKLTELGNDSCSSKELEKIKPLVKMCGITSAKDAAMAAEAGANFIGMIIWPNSKRSVSLSVAKEISKVARDYGADPVGVFVDDDAEAILRASDAANLEFVQLHGSGSRSAFPFLIQENRVIYVLHANADGSLLNTIPDEECSLVDWVLVDSAKGGSGEAFDWAQFKLPKIRSKYGWLLAGGISPKNVCEALSTLKPEGVDVSSGICASDGIQKDKSRIVSFMDAVRSAQY 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02100 275 SUPERFAMILY Ribulose-phoshate binding barrel 67 271 IPR011060 -
Trre5g02100 275 Gene3D Aldolase class I 65 274 IPR013785 -
Trre5g02100 275 Hamap N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 66 273 IPR001240 GO:0004640|GO:0006568
Trre5g02100 275 CDD PRAI 68 270 IPR001240 GO:0004640|GO:0006568
Trre5g02100 275 PANTHER N-(5'-PHOSPHORIBOSYL)ANTHRANILATE ISOMERASE 21 275 IPR044643 GO:0000162|GO:0004640
Trre5g02100 275 FunFam Tryptophan biosynthesis protein TRP1 66 272 - -
Trre5g02100 275 Pfam N-(5'phosphoribosyl)anthranilate (PRA) isomerase 68 268 IPR001240 GO:0004640|GO:0006568
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02100 Trre-Chr5 15663750 15667433 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02100 K01817 - gmx:100812873 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02100 5 15663750 15667433 Trre5g02100 5 15663750 15667433 ECH