Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02083 ATGACCACACTTTATTCACCTTCCTCCGCCGCAAAACCCACCATGGAAGACACCAACAACCGCCGTTCCAAAAAGAACCGCCGTCGTCCCTCAGCTACTCCAACAAACGGCGAGTATTCCGACATGGAGGAAGCAGAAGACGGCGATCCCGAGGCATGGGCAACACTGAACAAGAGTTTCCGTCAGGTTCAGTCGGTGCTTGATCGGAACAGAGCAATTATTCAACAGGTGAATGAGAATCAACAATCTAGAATGCCTGATAATATGGTGAAAAATGTTTCTTTGATTCAAGAATTGAATGGGAATATCTCTAAGGTTGCTTCTCTTTATTCTGATCTTAATTCTGATTTCACTAATATTTGTCATCAACAACAAAAATCTTCAAACACACGTGGTGGCAAATAA 405 0.4321 MTTLYSPSSAAKPTMEDTNNRRSKKNRRRPSATPTNGEYSDMEEAEDGDPEAWATLNKSFRQVQSVLDRNRAIIQQVNENQQSRMPDNMVKNVSLIQELNGNISKVASLYSDLNSDFTNICHQQQKSSNTRGGK 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02083 134 Pfam Early Flowering 4 domain 48 127 IPR009741 -
Trre5g02083 134 MobiDBLite consensus disorder prediction 1 50 - -
Trre5g02083 134 PANTHER PROTEIN ELF4-LIKE 4 35 129 IPR040462 GO:0042753
Trre5g02083 134 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02083 Trre-Chr5 15503265 15503669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02083 - - ahf:112715393 169.474