Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02077 ATGGCTTCTTTATGGCGCGCAGGGACCAAGCTAACTCTCCTAGCATCCGCCCTCGGCGGCGGTGGTGCAGCGGCCCTCATTGCCACCTCTGACGATCCTGCAACAGCGCTCAAGCTCTCCACAACCATTCCCCGCCGACTCTTTGACGACGCCGTCGCTGCCGCCAACATTGTCTACGATTATGAATATTCACTGTGGGGAATACCAGAAGGAAGTAGTAAGAGGGAGAAAATCAAGCACGAAGTTCACCTTCGTTCGGCGCAAAGGCTTCGAGACCTCTGTTTTAAGAATGGAGGGATTTATATAAAGCTTGGACAACATCTTGGGCAGTTGGAATACTTAGTTCCTCAAGAGTATGTTCAGACCATGAGGGAGTCCATGCTAAATAAATGTCCAGTTTCTTCATATGAACAAATATGTGATGTATTCAAGAAAGAGTTTGGAGAGACACCAGATAAAGTATTTGCCGAGTTTGATCCAGTTCCAATAGCAAGTGCTTCCCTTGCTCAAGTTCATGTAGCCCGCACACATGATGGCCAAAAAGTTGCTGTGAAGGTCCAACATCCTCACATGACTGAAACTGCGGCTGCTGATCAAGCCACTGTGGAATTGATTGTCAACACTCTGCATAATTTTTTTCCTAGTTTTGATTATAGGTGGTTGATTGATGAGATTAAAGAGAGTTTACCACAGGAATTGGACTTTTTAACCGAGGCAAAGAACAGTGAGAAGTGTTTGGAGAACTTCCGCAACTTGTCTCCTCATATTGCAAATTATGTGTATGCACCAAAAGTATATTGGAGTCTGAGTACCTCAAAGCTGCTTACAATGGAATACATGGACGGTGCTTATGTAAATGATGTGAAGACCATAAAGAAACTAGGGATCCGTCCACATGAACTTTCAGTATTGGTTAGTCAAACTTTTGCTGAAATGATGTTCAAGCACGGGTTTGTACATTGTGATCCACATGCTGCTAATATGTTGGTTCGCCCATTGCCTTCCAGCAAAGCTAGCATTCTAGGCTGGAGAAAACCACAGTTGATTCTCTTAGACCATGGACTCTATAGACAGCTTGACTTCAATACCAGAGCTAATTATGCTGAACTATGGAAGGCGTTGATATTTGCTGATGCTGATGGGATCAAGAAATGCAGTATAAAGTTGGGTGTTGGGGAGGATTTATATCCACTTTTTGCTGGAGTTCTAACAATGAGACCATGGAATAGAGTTATTGACCCATCCATGGATCATTTAGTTATACAGGGTAGTGAGAGTGACCGTTCAGAACTGCAGATGTATGCTTCTGAATATTTCCATGAAATCTCTGAGCTTCTAAGGAGATTACCACGCGTGATTCTTCTAATGATGAAGACAAATGACTGTTTACGAGCAGTCAACAATACCCTGATACAGGGATCATCTCTTGAGACATTTTTTATCATTGGAAAGGTTTCTTCCGAGGCTGTCATTGACGCAAAAATGTCACAAAGCAAGTCAGTTGTAACTTGGTTTAACATTAAATTGGATAAGATTTTTCTGGAAATGCGGCTTTGGGCAATGCAGATGGCCCTGTGGCTTTTACAACTGAGAAAGGCTTTGCCTTGGTCTCACTAA 1617 0.4304 MASLWRAGTKLTLLASALGGGGAAALIATSDDPATALKLSTTIPRRLFDDAVAAANIVYDYEYSLWGIPEGSSKREKIKHEVHLRSAQRLRDLCFKNGGIYIKLGQHLGQLEYLVPQEYVQTMRESMLNKCPVSSYEQICDVFKKEFGETPDKVFAEFDPVPIASASLAQVHVARTHDGQKVAVKVQHPHMTETAAADQATVELIVNTLHNFFPSFDYRWLIDEIKESLPQELDFLTEAKNSEKCLENFRNLSPHIANYVYAPKVYWSLSTSKLLTMEYMDGAYVNDVKTIKKLGIRPHELSVLVSQTFAEMMFKHGFVHCDPHAANMLVRPLPSSKASILGWRKPQLILLDHGLYRQLDFNTRANYAELWKALIFADADGIKKCSIKLGVGEDLYPLFAGVLTMRPWNRVIDPSMDHLVIQGSESDRSELQMYASEYFHEISELLRRLPRVILLMMKTNDCLRAVNNTLIQGSSLETFFIIGKVSSEAVIDAKMSQSKSVVTWFNIKLDKIFLEMRLWAMQMALWLLQLRKALPWSH 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02077 538 CDD ADCK1-like 126 390 IPR045307 -
Trre5g02077 538 PANTHER ABC1 FAMILY PROTEIN 34 488 - -
Trre5g02077 538 Pfam ABC1 atypical kinase-like domain 127 385 IPR004147 -
Trre5g02077 538 SUPERFAMILY Protein kinase-like (PK-like) 132 331 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02077 Trre-Chr5 15460955 15467256 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02077 K08869 - gmx:100796182 910.983
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02077 5 15460955 15467256 Trre5g02077 5 15460955 15467256 ECH