Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02069 ATGTCGAGCAGGATGAGGAACGAAGCTAGCAGTAGCAGCAAAACCCCAAAGGAAAGCGTCGTTGTTGATTACGGAAAGCGTCGAAGCTCTTGTGGTTATTGTAGATCCCCTCGTCACAATAGCATCTCTCATGGCATGTTGGCAGAGAGCCTTACAGTGGATGACTACCAAGCTCTTCTTGATCAGGGCTGGAGAAGATCTGGATGTTTTCTTTATAAACCAGAGATGGACAAAACATGTTGCCCTTCCTATACAATCCGCTTGAAAGCAAGTGACTTTGTTCCCTCTAAGGATCAACTTCGTGTATCTAGACGAATGCAAAGGTTTTTAGATGGAACCTTGGATGTTAAAAAAGTTGATGTCATGAAGGAATCAAATACTTCAAAAACTTCAGAAAGCCTTGTCCATAATAACCCATCATGCTCCATGTCAGAAGAATCTCTATCTGTCGGCAACAAAGAGGTGGATGAAGATGAAAAATCTTTGCACTATTTATCGGATCAGATTGATAATGTAACACACATGTTCACCAAGACCGGGGAATTTCCATCTAGTATTCAATTACCAAAAGCTTCAGTCAGAATGGTTTCACAGGGGAAAAAAAAGATCTTAGCCAATGGATCCGAAGATCTATTATATAGTAGCAATATAGCCTTTCAAGTTGCTGCCTCTATAAAACGAGCACAGTCAAAGGACAAGGATGGTAGTGATTCCAAACCATCAAGAGATAGTGAGAAGGAAAATGGATATTCTCCTAAAGTTATTGCAGAAAAGCTGGTAGCATCTTTAGATTCAACAATGAAAATTTCTGGTCTATCTATTAGGGCTTGCAATGGACATGTCAATTTTTATGCTTCTAGTAAGCAAGTTTCCCAAAATGGAACTGTTCAAAATGCTGCAATTCCTAAAAAATATGGAATGAAGTGTCAGTTTAAAAAGCGAAAGCTTGAGATCCGTTTGAACAGATCCAGTTTTGATCCAGAAGAACATGCTTTATTTGCAAGGTATCAGAGCAAAGTACATAATGATAAACCAGAAAATTACACGGAGAGCTCATATCGCAGGTTTTTGGTTGATACTCCATTATTATATGTTTCACCTACTGGTGATAACACAGTCCCTCCTTGTGGTTTTGGCTCTTTCCATCAACAGTATTTGGTGGATGGTCAGTTAGTAGCAGTTGGGGTTATAGATATCCTTCCTAACTGTTTATCAAGTAAATATTTGTTCTGGGATCCAGACTTTGCCTTTCTATCACTAGGCAAGTACTCTGCACTTCAAGAAATTGGTTGGGTGAAAAATAACCAGGTTAATTGTCCTAGTCTCCAATACTATTACCTTGGCTACTATATTCACTCTTGCAACAAGATGAGATACAAGGCTGCATATCGCCCTTCAGAACTTTTATGCCCTCTTCGTTATCAGTGGGTTTCATTTGACATTGCAAGGCCTTTGCTTGACAGAAAGCGTTATGTTGTCTTATCAGATGCTTCCATTTTACAAAATGGAGAGTCATCCCCACTTCAAGTTACTGAAGATCAAGATGCAATGTTAATCCAGCTTGATGACAGTGGTCAAGAAGATGCAAATGATGTTCCAATGCATGAAGATGAAGAAATGGTTCAGTTTGAATCGGGAAGCTCTGATGATGAATATGATGAACCTGATATACAAATTACTTCACATGGTGAACCAAAAAATGATGATTTCAGCGAAGTTTTGCTAGGGATAAGGGGATCTCGTGTGAGATATAAGGATCTGCGAAGTATGTTTGGTCCTGAGCAGCAGAGATACTTGGAGTCACAGTTGCAGAAATACAGGAGAGTTGTGGGTCCAGTGTTATCCGAGCGAATGGTCTACTCTCTCGGTTAA 1872 0.3969 MSSRMRNEASSSSKTPKESVVVDYGKRRSSCGYCRSPRHNSISHGMLAESLTVDDYQALLDQGWRRSGCFLYKPEMDKTCCPSYTIRLKASDFVPSKDQLRVSRRMQRFLDGTLDVKKVDVMKESNTSKTSESLVHNNPSCSMSEESLSVGNKEVDEDEKSLHYLSDQIDNVTHMFTKTGEFPSSIQLPKASVRMVSQGKKKILANGSEDLLYSSNIAFQVAASIKRAQSKDKDGSDSKPSRDSEKENGYSPKVIAEKLVASLDSTMKISGLSIRACNGHVNFYASSKQVSQNGTVQNAAIPKKYGMKCQFKKRKLEIRLNRSSFDPEEHALFARYQSKVHNDKPENYTESSYRRFLVDTPLLYVSPTGDNTVPPCGFGSFHQQYLVDGQLVAVGVIDILPNCLSSKYLFWDPDFAFLSLGKYSALQEIGWVKNNQVNCPSLQYYYLGYYIHSCNKMRYKAAYRPSELLCPLRYQWVSFDIARPLLDRKRYVVLSDASILQNGESSPLQVTEDQDAMLIQLDDSGQEDANDVPMHEDEEMVQFESGSSDDEYDEPDIQITSHGEPKNDDFSEVLLGIRGSRVRYKDLRSMFGPEQQRYLESQLQKYRRVVGPVLSERMVYSLG 623
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02069 623 MobiDBLite consensus disorder prediction 125 147 - -
Trre5g02069 623 PIRSF ATE1_euk 9 623 IPR017137 GO:0004057|GO:0016598
Trre5g02069 623 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 315 483 IPR016181 -
Trre5g02069 623 Gene3D - 210 309 IPR036695 GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420
Trre5g02069 623 MobiDBLite consensus disorder prediction 126 147 - -
Trre5g02069 623 PANTHER ARGININE-TRNA-PROTEIN TRANSFERASE 1 17 621 IPR030700 -
Trre5g02069 623 MobiDBLite consensus disorder prediction 1 18 - -
Trre5g02069 623 MobiDBLite consensus disorder prediction 1 23 - -
Trre5g02069 623 Pfam Arginine-tRNA-protein transferase, C terminus 328 470 IPR007472 GO:0004057|GO:0016598
Trre5g02069 623 MobiDBLite consensus disorder prediction 228 250 - -
Trre5g02069 623 Pfam Arginine-tRNA-protein transferase, N terminus 29 99 IPR007471 GO:0004057|GO:0016598
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02069 Trre-Chr5 15369118 15373742 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02069 K00685 - gmx:100780234 920.998
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02069 5 15369118 15373742 Trre5g02069 5 15369118 15373742 ECH