Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02064 ATGATGATGTTTTCTGCTACTACTCTTCCTATTTCTCCCATTTCTGTAAAATCATCATCCACAATGCAATCCCTACCGTTTTCCAATAGACTTATGGTTCCTTCCGGTAGCCGTCTATCTCCGGCGATGTTCACCGGTGTTTCAATGGGTGGCAGCCGTTCACTCCCTTGTGTCACACTGAGGTGTTCTTCAATTCCAACTGCATCATCCATTGTTGAGGAAGTTGACGCAAGAAGGAAGTTTATAGAGGCAACAAAAGATGGAAACTTGATTCCTCTCTATCAGTGCATATTCTCTGATCAGCTTACTCCTGTTCTTGCTTATCGGAGTTTGGTTAATCAAGATGACCGGGAAGCTCCGAGCTTTCTTTTTGAGTCAGCTGAGCCTAATTTTCAAGGTTCTAATGTGGGGCGTTACAGTGTTGTTGGAGCTCAACCAACAATGGAAATTGTTGCAAAAGAGAATAAGGTTACAGTAATGGACCATGAATCTGGTCAATTAACTGAGGAGATTGTTGATGATCCTATGGAGATTCCAAGAAAAATCTCACAGGATTGGAGACCATGTCTTAGTGATGAACTTCCCGATGCATTCTGTGGTGGTTGGGCAGGTTATTTCTCTTATGACACAGTTCGTTATGTGGAAAAGAAAAAACTACCATTTTCAGATGCCCCAAAAGATGACAGGAACCTCGCAGACATCCATCTGGGCCTTTATGAGACTGTGATCGTGTTTGATCATGTGGAGAAGAAAGCATATGTGATTCTTTGGGTGAGGACTGACCAATACTCATCAGCTGAGAGTGCTTACGAGGATGGAACAAAACGATTAAAAACATTAGTGGCCAAATTACAAGACGACAAACCCCCGAGGCTGGCTCCTGGTGCTGTGGAATTGAAAACTCGACATTTTGGTGCTCCTTTAAAGGAATCAAACATGACAGCTGACGCATATAAGGAGGCGGTCCTTCAGGCAAAAGAACATATTAAAGCTGGAAATATTTTCCAGATTGTTTTAAGTCAGAGATTTGAACGAAGAACCTTTGCTGATCCATTTGAAGTTTATAGAGCATTAAGAGTTGTGAATCCAAGTCCATATATGACTTATTTGCAGGCTAGGGGATGTATTCTGGTTGCTTCAAGTCCAGAGATTCTTGCGCGTATAAAGAATAAGAAGATTGTGAATCGTCCTTTGGCTGGGACATCTAAGAGGGGCAACACGGTAGAAGAAGATGAACAGTTATCAGCGAAACTCTTGAAAGATGAAAAGCAATGTGCAGAACATGTAATGCTGGTTGATTTGGGGCGCAATGATGTTGGAAAGGTCTCAAAAAGTGGTTCTGTTAAAGTTGAGAAGCTTATGAATGTTGAACGATATTCGCATGTGATGCACATTAGTTCAACGGTTACGGGAGAGCTGCAAGACCATTTGACCTGCTGGGATGCCCTTCGTGCTGCCTTGCCTGTTGGAACTGTCAGCGGAGCACCGAAGGTGAGAGCGATGCAGTTAATCGATGAATTGGAGGTGGCAAGGCGAGGACCTTACAGCGGAGGATTTGGATACATATGTTTCTCTGGCGATATGGACATTGCACTAGCTTTGAGGACAATAGTATTTCCGACTGGAACTAGGTACGACACAATGTACTCGTACAAAGACCTCAACAAACGCCAGGAGTGGATTGCTTACCTTCAAGCTGGTGCTGGTATAGTTGCTGACAGTGACCCTGCTGACGAACACCAAGAGTGTCAAAACAAAGCTGCTGGTCTTGCTCGTTCCATTGACTTGGCCGAGTCTGCTTTTGTCGATAAGTAA 1815 0.4364 MMMFSATTLPISPISVKSSSTMQSLPFSNRLMVPSGSRLSPAMFTGVSMGGSRSLPCVTLRCSSIPTASSIVEEVDARRKFIEATKDGNLIPLYQCIFSDQLTPVLAYRSLVNQDDREAPSFLFESAEPNFQGSNVGRYSVVGAQPTMEIVAKENKVTVMDHESGQLTEEIVDDPMEIPRKISQDWRPCLSDELPDAFCGGWAGYFSYDTVRYVEKKKLPFSDAPKDDRNLADIHLGLYETVIVFDHVEKKAYVILWVRTDQYSSAESAYEDGTKRLKTLVAKLQDDKPPRLAPGAVELKTRHFGAPLKESNMTADAYKEAVLQAKEHIKAGNIFQIVLSQRFERRTFADPFEVYRALRVVNPSPYMTYLQARGCILVASSPEILARIKNKKIVNRPLAGTSKRGNTVEEDEQLSAKLLKDEKQCAEHVMLVDLGRNDVGKVSKSGSVKVEKLMNVERYSHVMHISSTVTGELQDHLTCWDALRAALPVGTVSGAPKVRAMQLIDELEVARRGPYSGGFGYICFSGDMDIALALRTIVFPTGTRYDTMYSYKDLNKRQEWIAYLQAGAGIVADSDPADEHQECQNKAAGLARSIDLAESAFVDK 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02064 604 Pfam chorismate binding enzyme 316 586 IPR015890 -
Trre5g02064 604 FunFam Anthranilate synthase component 1 68 602 - -
Trre5g02064 604 NCBIfam anthranilate synthase component I 99 594 IPR005256 GO:0000162|GO:0004049
Trre5g02064 604 Pfam Anthranilate synthase component I, N terminal region 100 254 IPR006805 GO:0009058
Trre5g02064 604 Gene3D Anthranilate synthase 68 602 IPR005801 GO:0009058
Trre5g02064 604 SUPERFAMILY ADC synthase 88 598 IPR005801 GO:0009058
Trre5g02064 604 PANTHER AMINOBENZOATE/ANTHRANILATE SYNTHASE 77 603 IPR019999 GO:0009058
Trre5g02064 604 PRINTS Anthranilate synthase component I signature 525 539 IPR019999 GO:0009058
Trre5g02064 604 PRINTS Anthranilate synthase component I signature 430 443 IPR019999 GO:0009058
Trre5g02064 604 PRINTS Anthranilate synthase component I signature 510 524 IPR019999 GO:0009058
Trre5g02064 604 PRINTS Anthranilate synthase component I signature 416 429 IPR019999 GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02064 Trre-Chr5 15341564 15346370 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02064 K01657 - gmx:100790900 932.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02064 5 15341564 15346370 Trre5g02064 5 15341564 15346370 ECH