Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02018 ATGGCATCTTCACGTCCACCGCCATCGAAATCAGTAGATCTCGACCTCACCATCGTTTCCGCCAAACACCTCAAAAACGTCAACTGGAAAACCGGCGATCTCAAACCCTACGTCGTTTTCTGGCTCGATCCTGACCGTCGACTCGCCACCAAATCCGACGATTCCGGCAACACTTCCCCTGTCTGGAACGAACGTTTCACTCTCTCTCTTCCACTTCCTCTTCAAGACACCACTCTCACTCTCGAGATCTTCCATTCCAAACCTTCCGATACCCCCAAACCCCTCGTCGCTACCCTTCGCCTCCCCCTCAGAGACCTTCCTGAACTCGATCACTCCACCGTCGTCCGGAAATTCCCTCTCGTTCGACCCTCCGGTCGTCCCCAAGGTAAAATTCACCTCAAAATTAGCCTCCTCGGTCGCTCTCCTCCCCCTCCGCCACAGCCACAAACCTTTGATTACCTCAATCTCAACCCTAACCCTAATCCTAATCCTAATCCTTATTCTAGACCTAATCCAAATCCTAATTCTAATCCTTCCTTTGTTTATTACAGAGGAGGATATTCCTCTGTAGATTTACCTTCTCAGACACCACCTTCACCTTACACTTCTTACAACTCTTACCCTGATTCCCTCAATGGCGGTTACTATCCTGGGTACTATTCAGGCGCTCCTTACCCTCCACCGCCTCCGAGGCCTTTCTTTGATCGTGCCAGCAGTAGCAGCAGCAGTTATGCTGCTGCTGCTGGGCCGAGTGGACCGTCTGCCCCGCTTGAATATTCCACCTCGGTTGATCCGAGGCCTAAAGGCGGTAAGATGGGGTTAGGTGCTGGCCTTGCTGTTGGTGCTGCTGCTGCGGCTCTGAGTGGAATTGCTCTTGAAGAAGGGATGAGGTATGAAGAACGCAAGCTTGCGGAAATGGTTGAAAGTGATGTTGCTTCTGCTAGAGATGGTTATGGCGAGGGCCATTACCGAGATTATTGA 981 0.5148 MASSRPPPSKSVDLDLTIVSAKHLKNVNWKTGDLKPYVVFWLDPDRRLATKSDDSGNTSPVWNERFTLSLPLPLQDTTLTLEIFHSKPSDTPKPLVATLRLPLRDLPELDHSTVVRKFPLVRPSGRPQGKIHLKISLLGRSPPPPPQPQTFDYLNLNPNPNPNPNPYSRPNPNPNSNPSFVYYRGGYSSVDLPSQTPPSPYTSYNSYPDSLNGGYYPGYYSGAPYPPPPPRPFFDRASSSSSSYAAAAGPSGPSAPLEYSTSVDPRPKGGKMGLGAGLAVGAAAAALSGIALEEGMRYEERKLAEMVESDVASARDGYGEGHYRDY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02018 326 Pfam C2 domain 13 108 IPR000008 -
Trre5g02018 326 Gene3D C2 domain 3 138 IPR035892 -
Trre5g02018 326 CDD C2_SRC2_like 13 133 IPR044750 GO:0006952
Trre5g02018 326 MobiDBLite consensus disorder prediction 174 205 - -
Trre5g02018 326 MobiDBLite consensus disorder prediction 136 205 - -
Trre5g02018 326 PANTHER INGRESSION PROTEIN FIC1 14 287 - -
Trre5g02018 326 MobiDBLite consensus disorder prediction 230 270 - -
Trre5g02018 326 MobiDBLite consensus disorder prediction 159 173 - -
Trre5g02018 326 ProSiteProfiles C2 domain profile. 1 116 IPR000008 -
Trre5g02018 326 SMART C2_3c 13 115 IPR000008 -
Trre5g02018 326 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 6 143 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02018 Trre-Chr5 15035428 15036408 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02018 - - cam:101506439 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02018 5 15035428 15036408 Trre5g02018 5 15035428 15036408 ECH