Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02010 ATGGAAACTGGTATAGCATGTTACTCCCGTGGTGCTTTTCTTCCTACTGTTTCTTCCAAACACTCCCTACCCTCTATTACTCCCTCTTCTACCTTCAGGAATTTGAAATCAAGCTCTTTCTTTGGAGAATCACTTAGAGTGTCATCAAAATCAACACTGAAGTTTTCAAGAACAAAAGCTACTTCATTCATAACCAAGTGTGAAATTGGTGACAGTTTGGAAGAATTCCTATCAAAGGCGACACCGGATAAGGGGCTGATTAGATTGTTGGTGTGCATGGGAGAAGCATTAAGAACAATTTCATTCAAAGTGAAGACAGCTTCTTGTGGTGGAACACAATGTGTTAATTCTTTTGGGGATGAACAGCTTGCAGTGGATATGTTGGCTAACAACCTTCTTTTTGAGGCTTTAAAACACTCTCACTTCTGCAAGAATGCATGTTCAGAAGAAATCCCCGAGCTTCAAGACATGGGAGGGCCAGTTGAAGGTGGATTTAGTGTTGCATTTGACCCTCTTGATGGTTCCAGCATAGTAGACACAAATTTCACAGTAGGCACAATCTTTGGTGTGTGGCCTGGTGAGAAGTTGATTGGAGTCACCGGAAGAGATCAAGTTGCGGCGGCTATGGGAGTTTTAGGTCCTAGAACTACTTATGTGCTTGCTCTTAAAGATTTCCCTGGTACTCATGAATTTCTCCTTCTTGATGAAGGAAAATGGCAGCATGTCAAAGAGACTCATGAAATTGGTGAAGGAAAACTATTCTCCCCTGGAAATTTAAGAGCTACATTTGACAATGCCAATTATGCCAAGTTGGTTGATTACTATGTCAGAGAAAAATACACTTTGAGATACACCGGAGGAATGGTGCCGGATGTCAACCAGATTATTGTAAAAGAAAAGGGTATATTTACAAATGTGACATCACCAACTGCAAAAGCCAAGTTGAGACTGTTGTTTGAGGTAGCTCCATTAGGACTATTGATTGAAAATGCTGGAGGTTACAGCAGTGATGGTTATAAATCTGTCCTAGACAAGGTCATTGAAAACATTGATGATAGAACTCAAGTTGCTTATGGATCAAAGAATGAGATCATTAGGTTTGAAGAAACATTGTATGGTTCATCAAGACTCAAGGGTGGTGTACCTGTTGGAGCATCTGCTTAA 1164 0.4055 METGIACYSRGAFLPTVSSKHSLPSITPSSTFRNLKSSSFFGESLRVSSKSTLKFSRTKATSFITKCEIGDSLEEFLSKATPDKGLIRLLVCMGEALRTISFKVKTASCGGTQCVNSFGDEQLAVDMLANNLLFEALKHSHFCKNACSEEIPELQDMGGPVEGGFSVAFDPLDGSSIVDTNFTVGTIFGVWPGEKLIGVTGRDQVAAAMGVLGPRTTYVLALKDFPGTHEFLLLDEGKWQHVKETHEIGEGKLFSPGNLRATFDNANYAKLVDYYVREKYTLRYTGGMVPDVNQIIVKEKGIFTNVTSPTAKAKLRLLFEVAPLGLLIENAGGYSSDGYKSVLDKVIENIDDRTQVAYGSKNEIIRFEETLYGSSRLKGGVPVGASA 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02010 387 ProSitePatterns Fructose-1-6-bisphosphatase active site. 313 325 IPR020548 GO:0005975|GO:0042578
Trre5g02010 387 Pfam Fructose-1-6-bisphosphatase, C-terminal domain 250 370 IPR044015 -
Trre5g02010 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 252 268 IPR023079 GO:0005975|GO:0016791
Trre5g02010 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 198 216 IPR023079 GO:0005975|GO:0016791
Trre5g02010 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 344 368 IPR023079 GO:0005975|GO:0016791
Trre5g02010 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 138 158 IPR023079 GO:0005975|GO:0016791
Trre5g02010 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 282 302 IPR023079 GO:0005975|GO:0016791
Trre5g02010 387 PRINTS Sedoheptulose-1,7-bisphosphatase family signature 122 137 IPR023079 GO:0005975|GO:0016791
Trre5g02010 387 FunFam Sedoheptulose-1,7-bisphosphatase, chloroplastic 245 385 - -
Trre5g02010 387 CDD FBPase 69 371 IPR000146 GO:0005975|GO:0016791
Trre5g02010 387 Gene3D - 245 385 - -
Trre5g02010 387 Gene3D - 68 244 - -
Trre5g02010 387 SUPERFAMILY Carbohydrate phosphatase 66 370 - -
Trre5g02010 387 PANTHER FRUCTOSE-1,6-BISPHOSPHATASE-RELATED 71 371 IPR000146 GO:0005975|GO:0016791
Trre5g02010 387 Pfam Fructose-1-6-bisphosphatase, N-terminal domain 64 244 IPR033391 -
Trre5g02010 387 FunFam Sedoheptulose-1,7-bisphosphatase, chloroplastic 68 244 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02010 Trre-Chr5 14962595 14965347 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02010 K01100 - gmx:100786122 683.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02010 5 14962595 14965347 Trre5g02010 5 14962595 14965347 ECH