Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02009 ATGTCTGCTTATGCACATCAAATGGAGCAGCAGTATTCTGCAGTTAATCTTTCAGATGATTCTGATACATCAAGCCATTATGGGTTAGATTCAGGATTCTACATGACATCTTTTACTGCAACAATCTTTCTTGCTTCACTTGCCATTCTTGGAATTTTATTAATTACTTTGCTGGTTTCCTTGGCGATTATGCTACAATCATGTCAAAGTAAAAACGGTGGAGCTATTGAACTTCAGAATACAAATGATTACCACAGTTATTGCAGGATGCATTCTCTGCATGCTGAACTCAATAGCTTAGAAGAATATGATATTCCAAACATATGTAGAGATCTAGCTATACATTATATCAAAGGAGGTCAATATGCTAAAGACTTGAATTTAATTATGTCGATGATTGATGATTACTTCAAGAGTCTGAGACCTTCAAAGAATGGTTTGGATGTAGTGTTGATCGACATAGATGACATTATTGCTTCAAGTCCTTATTCTTCCAATTTCTATCATAGGTTTCATAGTGACAGGATTGGGAACTGTGTCAAAGAGGAAAAAGATGTAAAGCTCATGTTTGTTTTAAGATTATACATGAACCTTCAAACTAGTGGATGGTCTATAATTTTGTTATCAAGAGAGCCTGAAATATACCAAAATGTCACCATTAATCATCTAGTTTCAGCAGGTTTTAGAGATTGGTCTTCCTTGATGATGAGAGCAGAAGATTCAGATTCTATCAAAGGGAATGAGTATTTTTCTAGGCAAAGAAGTGTGATACAGAAGAAGGGCTACCATATAATAAGTATTATAAGTAGCCATTTGGATGTATTGACCGCTCCAGATAATCGAATACAAAAATTTCTACTTCCAAGCAACGTATGCGACAAGTTTGAACATCAGATAGAGAGCATAGATACAGGACATTAG 921 0.3507 MSAYAHQMEQQYSAVNLSDDSDTSSHYGLDSGFYMTSFTATIFLASLAILGILLITLLVSLAIMLQSCQSKNGGAIELQNTNDYHSYCRMHSLHAELNSLEEYDIPNICRDLAIHYIKGGQYAKDLNLIMSMIDDYFKSLRPSKNGLDVVLIDIDDIIASSPYSSNFYHRFHSDRIGNCVKEEKDVKLMFVLRLYMNLQTSGWSIILLSREPEIYQNVTINHLVSAGFRDWSSLMMRAEDSDSIKGNEYFSRQRSVIQKKGYHIISIISSHLDVLTAPDNRIQKFLLPSNVCDKFEHQIESIDTGH 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02009 306 Gene3D - 83 296 IPR023214 -
Trre5g02009 306 Pfam HAD superfamily, subfamily IIIB (Acid phosphatase) 80 277 IPR005519 -
Trre5g02009 306 PANTHER ACID PHOSPHATASE-LIKE PROTEIN 51 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02009 Trre-Chr5 14958815 14960683 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02009 - - gmx:100793007 399.053
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02009 5 14958815 14960683 Trre5g02009 5 14958815 14960683 ECH
Trre5g02009 5 14958815 14960683 Trre9g04298 9 50841616 50844281 PCT