Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02008 ATGTCTACTTCGCCTGCAAAAGCTAATTGGAACCCTGCATTCCATAAATTGTTTGTTGGGTTATGTCTCAAAGAAGTGTTGAAGGTGAATGAGCCCGGGGCTCGACTTACAAAGGAGGCTTGGAAGAACATTATTGAATCTTTTTATGTAAAGACTGGCGTGGAATACGACAAAAAACAATTCAAAAATCACTATGATTCCACCAGGAAACTATGGAAGGTCTGGGATAAGCTGGCTCGTGATAGTAGCATGAAATGGGATCCAAAAACTAAAAAATTTGGTGCTTCTGAAGAAGACTGGTGCGATTATATAAAGGAAAACCCAGAAGCTGCACAGTTTCAGTCTAAGGAAATCCAGTTTAAAGATGAATTGGATATCATCTTCGATGGAGAAATGGCTCCTGAGGAAATTAAAAGCTCAATACGCCTCAAGTGGCAGGATAATGCTTCAGCCAAATCTTCTTTGCATGGAAAAGGGCGCGGGAGGAAGCGCAAGTGTGTTGTTATTAGGGATTCTGAAAAAGATACTTCTGATATGGTTAATTCCCCGCTAACTCCAAAAGCCTCATGGACAGCTGCATACCATAAAATATTTGTTGATTTATGCCTTGAAGAAACTTTGAAGGGGAACAAGGCCGGGACACATTTTACCAAGGAGGGCTGGAGGAATATTATGGATTACTTTCATGCAAAGACCGGTGTGAGATATGAGAAAAGACAAATTAAGAATCACTATGATTCAACCAGAAAACAATGGAAAATCTGGGTTAAGTTGATTAGTGATGATATCATGAAATGGGACCCAGAAACCAATACGTTTGGGGCTTCAGAGAAAGAATGGCTTGATTATCTAAAGGAGAACCCAGAAGCTGCACAATTCCGCTTTAAGGAAATCCCATTTTGCGACAAATTGGATATCATCTTTGGTGATAGTTTACAATCCGGGGAAATTAAACCTTCAACTAGTAGCGAGAGGCAGAATGATGATTCAGCAGCTACATCTCCTTTATCTGAAGAGCGAGGGAAGAAACATAAGAGCGTTAATGTGGATTTTGACTTTAAGAGTGCTATTTTGGTTAATGCTACACCGATCAGTGCAATTGCGAGTGAGCAAAGCATATCATGCTCATCATTTGCTAAGGTCAAAGCCAACTGGACCCCTTCATTGCACAAAACCTTTATTGATCTATGTCTGCAGGAGACATTAAATGGAAATAAGCCTGGGACTCATTTTACTAAGGAAGGTTGGAAGAATATTATGGATTCATTTCATTTGAAATCTGGTTTGACTTATGGCAGATTACAATTTAAGAATCACTGGGATAATACAAAGGAACAATGGAGGATTTGGACTAAGCTTGTTTCCACTAGTTATATGAAATGGAATCCATCTAAGCATATATTTGAGGCTAGTGAAGAAGATTGGTCTAAATATTTAAAAGCAAACCCAGAAGCTGCCCCATTTCGCTATAAGGAACTACAATTCACTGACGCATTGGATACCATCTTTAATGGTACTACTGTTACCGGGGAGACTGTACCTGCTTTGAAACAAAGGAAAAGTGATGACAGCGTTAATACTTTGCCTTTGCGCGTTAAAGAACCAGATGTAACCAGTTCGGATGAGAAGACTGAATATCTTTGTGATGCTGTTGCATCAAGAAATGGTGCGAGTATTCAAAAGAATGCCGTTGCAATTTCTTCTGCTGAAGGCAAACGTAATTATAGTATCGGTGAATGCATTGAATGCCTTGATGGAATGAAAGACTTAGAGCAAGGAAGTGACCTCTATTTGTTTGCTTTAGATGTGTTCCTTAGGCCGGAACATAGGGAAATTTTTCTCCAGTTGAAAAAGCCTAATCTGAGGATCTCATGGTTGCAGCGGCTTCAATCTGTTGGTCAATCTTCAGTCTAG 1914 0.3971 MSTSPAKANWNPAFHKLFVGLCLKEVLKVNEPGARLTKEAWKNIIESFYVKTGVEYDKKQFKNHYDSTRKLWKVWDKLARDSSMKWDPKTKKFGASEEDWCDYIKENPEAAQFQSKEIQFKDELDIIFDGEMAPEEIKSSIRLKWQDNASAKSSLHGKGRGRKRKCVVIRDSEKDTSDMVNSPLTPKASWTAAYHKIFVDLCLEETLKGNKAGTHFTKEGWRNIMDYFHAKTGVRYEKRQIKNHYDSTRKQWKIWVKLISDDIMKWDPETNTFGASEKEWLDYLKENPEAAQFRFKEIPFCDKLDIIFGDSLQSGEIKPSTSSERQNDDSAATSPLSEERGKKHKSVNVDFDFKSAILVNATPISAIASEQSISCSSFAKVKANWTPSLHKTFIDLCLQETLNGNKPGTHFTKEGWKNIMDSFHLKSGLTYGRLQFKNHWDNTKEQWRIWTKLVSTSYMKWNPSKHIFEASEEDWSKYLKANPEAAPFRYKELQFTDALDTIFNGTTVTGETVPALKQRKSDDSVNTLPLRVKEPDVTSSDEKTEYLCDAVASRNGASIQKNAVAISSAEGKRNYSIGECIECLDGMKDLEQGSDLYLFALDVFLRPEHREIFLQLKKPNLRISWLQRLQSVGQSSV 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02008 637 MobiDBLite consensus disorder prediction 316 343 - -
Trre5g02008 637 Pfam Myb/SANT-like DNA-binding domain 384 478 IPR024752 -
Trre5g02008 637 Pfam Myb/SANT-like DNA-binding domain 9 103 IPR024752 -
Trre5g02008 637 Pfam Myb/SANT-like DNA-binding domain 189 283 IPR024752 -
Trre5g02008 637 MobiDBLite consensus disorder prediction 316 334 - -
Trre5g02008 637 PANTHER - 380 629 IPR045026 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02008 Trre-Chr5 14955343 14957581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02008 - - gmx:100793529 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g02008 5 14955343 14957581 Trre5g02008 5 14955343 14957581 ECH