Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g02003 ATGTCGTCGGAATCATTACCTTCCACTCTCCGAGACACTCTCCTTCGGTTATCGAATTCAATCTCCGATTCTCTCGCCACAACTCTATACACTCCTCCCAAAAGCTCCAACATCTCCGTCAAAGCATTTCTCCAACCTCTTCTCTCATCCACAAATTCCATCAAAGACTTCGCTCTAGCATGCGCTCTTCTATCCTCATCCACACAATCCAATTCAGACCTTCTTTCATGGATCCCCAATCACCTTTCCTCCCTTGCAACCGCTTCCTTTTTCGAACTCTCCCAAGTTTACTTAACACACTTCCAAGATAGAAACTCTCAGAAGCTTGATGAATTGGGTTTGAATTCTAACCTGGTTCCTTCACAGAACAGGTTGCTAATTGAATTGTTTCCTGAAGTAATTCCTTTTTTAAAAGAGAGAATTAAGGAGAGTTCTGTTGATAAGTCTGATGAGTGTAATGAGTTTTCTGCCGCGTCTGCTAGAGTTCCGGTTGGGTTTGCGATTCTTGCTGCTTATCAGTTTAGATGGTTTGTTACTCAGGTTGATTATCCTCATTTGGGCAAGTTGTGTGGATGGGTGATCCCTTGTGCATTGACTGCTGTTGATCATTGGTCGCCAGCGGTGAAGGGACAGGGCATGATTAGCTTTATGCATCTTGGAAAAAATGTGGACGCTGCTGAGCTCGGAGGGTTCGAGGATGTGATACTTGATGCCTGCTGCCAGAATATAGCTTCTGATGATGAAATATGGCACTGTGTAGTTGAGGCATCAATAACTCTCCTGTCTCTTACACATAAAAGTAATCCCCGCAGTCCATGGTTTGAAAAGATGTTGAATGAGATGTTAAGTCACTTGGAGCGTCAACCAAGAAACAAAGAGCGCCGCATTGCATGGCTTAAATCTGTTTGGATGCATGCAGATGATGATGATACTATTATTTTGGTTCTGAAGTGTACTTACGAAGTTTTGAGACTGACATGGATTAGGAACTCGCCTTATGTTGCAAGATCGATAGATGAACTTGCTCTTGTGTATAAGGAGGCAGCACTAAGAACAGCCCGTGAAGAGATTAGAGCAAATATATCTCAGATTCTGGTCCTACTTCAAGAAAGCAAAGGCCAGCATTTTAATGTAGCATGGGACAAGCATAAATCCGATCCAGATTTGACCTCTCTTAGTCTGTCATTAAGTGGAAGAAACAGTTGTAACCTTGATACCCTGCCTTCAGAGAATAGTCTGCAGAATTCTGGAATCGTTCAAACATGA 1266 0.4281 MSSESLPSTLRDTLLRLSNSISDSLATTLYTPPKSSNISVKAFLQPLLSSTNSIKDFALACALLSSSTQSNSDLLSWIPNHLSSLATASFFELSQVYLTHFQDRNSQKLDELGLNSNLVPSQNRLLIELFPEVIPFLKERIKESSVDKSDECNEFSAASARVPVGFAILAAYQFRWFVTQVDYPHLGKLCGWVIPCALTAVDHWSPAVKGQGMISFMHLGKNVDAAELGGFEDVILDACCQNIASDDEIWHCVVEASITLLSLTHKSNPRSPWFEKMLNEMLSHLERQPRNKERRIAWLKSVWMHADDDDTIILVLKCTYEVLRLTWIRNSPYVARSIDELALVYKEAALRTAREEIRANISQILVLLQESKGQHFNVAWDKHKSDPDLTSLSLSLSGRNSCNLDTLPSENSLQNSGIVQT 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g02003 421 PANTHER OS06G0694100 PROTEIN 303 399 - -
Trre5g02003 421 SUPERFAMILY ARM repeat 12 298 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g02003 Trre-Chr5 14924806 14929531 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g02003 K23115 - gmx:100814295 565.459