Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01999 ATGTTTGAATTCTCCATTTTCATCTTTTTTACCTTAATCCTCTTTATACAACCTTGTTATTCTTCTTCTTCACATTTTCTTTCCAATAACCCGAATTTCGACCCTGACATTGATCTCTTCGGCGATGCAAAGGTTCTCGCCGATCACTCCGGTAATGGAACCCACGTCAAACTCATCCACAAATCTTCTCTCACCGCCGGCCTCCTCCTCCGTCGTCATCCCATCACTTTCTCAAACCTCACCTCATTCTCTGTCGAATTTACCTTCTCCATTTCCTCCGATATCGGAGACGGTCTTCTCTTCATTCTCATCCCTCATGATCTCGCCGCTGCATTCCCCGGTAACGGCTCTTACGGTCTTCAACCTTCTTATCCGACGAACAGTTATCTCGGCGTTGAATTTGATACCTCGAAAGATGACAATGTTAATGATTTGAACGAGAATCATGTCGGCATTGACGTTGGAAGCCTCGTATCTGTCGCGGTTGCGAATGTTTCCGCGTCGAATTTGGTTCTTAATAATGGTGAAAAGTTGAAATGTTGGATTGATTATGAAGCTGAGTCACAAATATTGGAAGTTAGATTAAGCAAATTGAATGAAGCTAAATCTGAAAATCCAATTGTTTCACATAATATTGATTTGTTTAAGATTTGGGGTGATCAATCTGTGTTTATGGGTTTGAGTTCTTCAAATGATGATAATTCTATTCAGGTTGTTCGTGTTTATTCATGGAAGGTTAGTTTGAAAAATTCTACAGTTTCAAATTCATTGCAATCTCAACCTGTTAATCCTAATGAAGATGAACAACAACAACCACAAGAAGAAGAAGAAGAAGCAAAGCTTGATGCCGCCGCCGCGAAAAAGAAGGATCGTCCTTTGACATTTCTTGCTGGTGTGATTTTTGGGACAGTTTGTGTTGTGTTGGTGACATTTGTGATTTTGTTTATGTGGGTGATTTTCTTCCATAAACATGAAGAAGAGTCTCTTGCTAAATTACCTGAAAATCCTTCTGATGTAAGGTATGAAAGGATTGATGTTGCTGTTGAAAACAATGCTGAAGATCATGATGAACAACAACATTAA 1083 0.3943 MFEFSIFIFFTLILFIQPCYSSSSHFLSNNPNFDPDIDLFGDAKVLADHSGNGTHVKLIHKSSLTAGLLLRRHPITFSNLTSFSVEFTFSISSDIGDGLLFILIPHDLAAAFPGNGSYGLQPSYPTNSYLGVEFDTSKDDNVNDLNENHVGIDVGSLVSVAVANVSASNLVLNNGEKLKCWIDYEAESQILEVRLSKLNEAKSENPIVSHNIDLFKIWGDQSVFMGLSSSNDDNSIQVVRVYSWKVSLKNSTVSNSLQSQPVNPNEDEQQQPQEEEEEAKLDAAAAKKKDRPLTFLAGVIFGTVCVVLVTFVILFMWVIFFHKHEEESLAKLPENPSDVRYERIDVAVENNAEDHDEQQH 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01999 360 CDD lectin_legume_LecRK_Arcelin_ConA 29 244 IPR001220 GO:0030246
Trre5g01999 360 PANTHER CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN 19 348 - -
Trre5g01999 360 SUPERFAMILY Concanavalin A-like lectins/glucanases 25 248 IPR013320 -
Trre5g01999 360 Gene3D - 22 250 - -
Trre5g01999 360 Pfam Legume lectin domain 32 254 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01999 Trre-Chr5 14884485 14885567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01999 41 235 Receptor kinase-like Gene Family AT5G03140 34.615 8.51e-20 89.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01999 - - tpra:123898370 552.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01999 5 14884485 14885567 Trre5g01999 5 14884485 14885567 ECH