Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01962 ATGCAAACGTTCCCTCCCAATAGTGGAGGAGGAAGCAGAGAACAGGGATATCAAACTCTCGGAACACCAACTGAAACTTTTGGGCAACAGGCAGCTAATAACTGGCAGGGATTCTTTAATGTCTCGTCTTACGCACAGTATTTCAATGTGGATACAGATGTTGTCGTCAACAGACTAATAAGTTCCTTGAATCCAGTCGGCGATGACTTTTTTGCAATGATAGATGCTAACCCTGATTTGTATGGGCTTATATGGATCTCAACAACATTGGTTTTTGTACTTACCTTACTTGGAAATCTTGCAACATACCTTATGCAAAAACATATAGATGACAAGACTTCGTGGAAATTTGATGTTAACTTTGTTAATACGGCTGCATGGTCTATATATGGCTATGTGATAGTTGTTCCATTGGCATACTACTTCTTCCTTCAGTATATGGGTTCAAATGCTAACCTTGTAAGATTTTGGTGCATGTGGGGGTATTCCCTCACCATTTTCATCCTGTCCTCTTTTCTATTGCTTATTCCATTTGAGATTCTTCGGTGGATTATAATAATCCTCACCGGCGCTGCCTCAGCTAGCTTTGTTGCTTTGAACCTAAGATCCTTTATAGGAAATGATCTTTCAGTGTCCATAATTGCAGCATTTGTCTTGCAAATAGCTTTGGCAGTCTTCATCAAAGTTCAGTTCTTCGAATAA 702 0.396 MQTFPPNSGGGSREQGYQTLGTPTETFGQQAANNWQGFFNVSSYAQYFNVDTDVVVNRLISSLNPVGDDFFAMIDANPDLYGLIWISTTLVFVLTLLGNLATYLMQKHIDDKTSWKFDVNFVNTAAWSIYGYVIVVPLAYYFFLQYMGSNANLVRFWCMWGYSLTIFILSSFLLLIPFEILRWIIIILTGAASASFVALNLRSFIGNDLSVSIIAAFVLQIALAVFIKVQFFE 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01962 233 PANTHER UNCHARACTERIZED 2 232 IPR039765 GO:0005794|GO:0016192|GO:0031267
Trre5g01962 233 MobiDBLite consensus disorder prediction 1 23 - -
Trre5g01962 233 Pfam Yip1 domain 64 227 IPR006977 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01962 Trre-Chr5 14598064 14599773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01962 K22940 - gmx:100813483 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01962 5 14598064 14599773 Trre5g01962 5 14598064 14599773 ECH