Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01928 ATGGCTCTTTTTCTTAACGCATCCTTGTCTTCCACTTCTAAACCTCATCATCACAATCTCTTGAAATCAAAACCTTCCTTTTCAACCAGCTCAGCAACTCCTCTTCCTTTGTTTCTGGCACCCAATCTGAAGCAACAAGTCTCTCAAAAACTCACATTATCATTTGGTGCATCAGTTTCTAGTGCTGCCCTTGTTGCTCTTCTATCTGCTTCTCTTTTCTTTGTTGATCCTGCACTAGCATTCAAGGGTGGAGGGCCATATGGTCAAGGGGTTACTAGGGGACAAGATCTTTCAGGGAAAGATTTCAGTGGCAAGACACTCATCAAGCAAGACTTCAAAACGTCCATACTTCGACAAGCCAATTTTAAAGGTGCAAATTTGTTAGGTGCTAGCTTCTTTGATGCTGATTTAACAGGTGCTGATCTTTCGGATGCTGATCTTAGAAGTGCAGACTTTTCCCTTGCAAATGTGACAAAGGTAAATTTGAGCAATGCTAATTTGGAAGGTGCACTCGTAACGGGAAATACATCTTTTAAGGGATCAAATATTACAGGCGCTGATTTCACTGATGTGCCACTAAGAGAAGATCAACGTGAATACCTCTGCAAAATTGCTGACGGAGTGAACTCAACAACTGGAAATGCTACACGCGATACATTGCTGTGCAATTAG 672 0.4182 MALFLNASLSSTSKPHHHNLLKSKPSFSTSSATPLPLFLAPNLKQQVSQKLTLSFGASVSSAALVALLSASLFFVDPALAFKGGGPYGQGVTRGQDLSGKDFSGKTLIKQDFKTSILRQANFKGANLLGASFFDADLTGADLSDADLRSADFSLANVTKVNLSNANLEGALVTGNTSFKGSNITGADFTDVPLREDQREYLCKIADGVNSTTGNATRDTLLCN 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01928 223 Gene3D - 80 223 - -
Trre5g01928 223 SUPERFAMILY Pentapeptide repeat-like 91 193 - -
Trre5g01928 223 PANTHER THYLAKOID LUMENAL 15 KDA PROTEIN 1, CHLOROPLASTIC 8 223 IPR044213 -
Trre5g01928 223 FunFam thylakoid lumenal 15 kDa protein 1, chloroplastic 80 223 - -
Trre5g01928 223 Pfam Pentapeptide repeats (8 copies) 115 153 IPR001646 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01928 Trre-Chr5 14360699 14368390 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01928 - - gmx:100500352 324.709