Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01914 ATGGATAATCTTGAACCGGTACCAATTACATCACAAAAACATGACCCAGCATGGAAGCATTGTCAGTTGTTTAAGAACGGTGAAAAAGTGCAACTAAAGTGCATATATTGTCTCAAGTTTTTTAAGGGTGGTGGGATTCATAGGTTTAAGGAACATCTTGCTTGTCAGAAAGGGAATGCTTCAATGTGCAGCAGTGTTCCTGCTGATGTTAGGCAACTTATGCAGCAGAGTTTGGATGGTGTTGTGGTGAAAAAGAGGAAGAGACAGAAAATTGAGGAAGAGATTATGAATGTTAATCCTTTAGCTACTGTTTTGAATGATGGTGGTTCAAATCAGATGGATGTGAATCTTGGGGTGCAGTCTTTTGGAGTTCATGATTCAGCGGGACAAAATTCGGGTCAAGTGTTGCATACTCCTGGTGATGGAATGAGTAAAAATGTTGAAAGAAGGAAGAAGATTAGAGCTACTAAGAATAATAATAATCATGCAGCAGCAGCAGCAGTGGTTTATACAACAAACTCCGAGCCTGAGCCTGTTGTTGCTCCCATGGACAAAAGTGCGTTGATCCCTAAAAAGGTGGACAGTCGGATTCATATGGCAATAGGTCGGTTTTTGTATGACATTGGTGCGCCTTTTGATGCTGTGAACTCGGTCTATTTTGATCAAATGGTTGAAGCAATTGCTTCTGGGGGCTCGGATTTTCAACGTCCCTCAAATCATGAACTTCGGGGTTGGGTCTTGAAAAATTCTGTGGAAGATGTGAAGAATGATATAGATAGATGTAAGATGACATGGGGGAGGACTGGCTGTTCCGTTTTGGTTGACCAATGGACTACAGAAGCTGGTAGAATACTGATAAGTTTTTTGGCTTATTGTCCTGAAGGTGTAGTTTTTCTGAAATCCCAAGATGCGACCGGGATATTGACTTCAGCGGAATTTTTATATGAATTGATAAAACAAGTAGTAGAGGAAGTTGGAGTAGGGCAAGTTGTGCAAGTGATTACATCGGGCGAAGAACAGTATGCTGTTGCTGGGAAAAGGTTGACTGATACTTACCCTAGCCTTTACTGGAGCCCTTCTGCGGCACATTGCATTGATTTGATACTTGAAGATTTTGGAAATCTTGAGTGGATTAGTGCAGTAATTGAACAAGCTAAATCTATAACAAGATTTGTCTACAATTACAGTGCAATTTTGAATATGGTTAGAAGGTATACTTTAGGGAATGATATTGTGGATCCCTCTTTCTCACGCTTCGCGACAAACTTTACCACGTTGAAACGAATGGTCGATCTTAAACACAATTTACAGTCCATGGTTACTTCTCAGGAATGGATGGATTGCCCATATTCAAAGAAAACAGCAGGTTTGGAAATGTTAGATACCCTAAGCAATCAAGACTTTTGGTCACAGTGCGATTTGATTGTTCGCCTGACACTTCCTCTCTTGAGAATCCTGAGAATTGCTTCCAGTGAGATGAGACCTGCAATGGGATACACTTATGCTGGAATGTACCGGGCAAAAGAAGCGATTAAAAAAGCACTTATAAAGAGGGAGGATTATCTGGTGTACTGGAATATTATACATCAAAGATGGGACAGGCTGTGGCATCATCCTCTTCACGGTGCAGGCTTCTTTCTTAATCCGAAGTTCTTCTATAGCATTCAAGGGGATGTACACAATGAGATTCTCTCAGGGATGTTTGACTGCATAGAGAGATTGGTTCCTGATACAAGAGTCCAAGATAAAATTATCAAAGAGTTAAACTTGTACAAGTCTGCTGCAGGAGACTTTGGGAGAAAGATGGCAATCAGAGCCAGAGATAATCTTCTTCCTTCTGAATGGTGGTCAACATATGGCGGAGGCTGCCCTAACTTGTCACGCTTAGCAATTCGAATTCTTAGCCAAACATCAAGTGTGATGTTCTGCAAGAGAAATCAAATTCCTTTTGAACAGATAATCAATACAAGGAATTGGATAGAGCGCCAACATCTTACTGATCTCGTCTTTGTTCATTACAACTTACGATTGAGACAAATGTTTACGAGTAAAGAACAAGAATCTAATGATCCCTTGTCATTCGACAACATTTATAATGTTGAAGACTGGATCAGGCCAAGGGATTTATACCAAGAATATGGGAACTCGGATTGGATGGCACTAGATTCATCTTCCATTAACACAATGCTTTTAAGGCCTTTAAATAATGAACCTGAAGAAATGTGTGAAGGGTTTGATGATCAGGAAATTTTCATGAGTCTGAAAAATGGCGAGGATGAGCATATCTGA 2289 0.4037 MDNLEPVPITSQKHDPAWKHCQLFKNGEKVQLKCIYCLKFFKGGGIHRFKEHLACQKGNASMCSSVPADVRQLMQQSLDGVVVKKRKRQKIEEEIMNVNPLATVLNDGGSNQMDVNLGVQSFGVHDSAGQNSGQVLHTPGDGMSKNVERRKKIRATKNNNNHAAAAAVVYTTNSEPEPVVAPMDKSALIPKKVDSRIHMAIGRFLYDIGAPFDAVNSVYFDQMVEAIASGGSDFQRPSNHELRGWVLKNSVEDVKNDIDRCKMTWGRTGCSVLVDQWTTEAGRILISFLAYCPEGVVFLKSQDATGILTSAEFLYELIKQVVEEVGVGQVVQVITSGEEQYAVAGKRLTDTYPSLYWSPSAAHCIDLILEDFGNLEWISAVIEQAKSITRFVYNYSAILNMVRRYTLGNDIVDPSFSRFATNFTTLKRMVDLKHNLQSMVTSQEWMDCPYSKKTAGLEMLDTLSNQDFWSQCDLIVRLTLPLLRILRIASSEMRPAMGYTYAGMYRAKEAIKKALIKREDYLVYWNIIHQRWDRLWHHPLHGAGFFLNPKFFYSIQGDVHNEILSGMFDCIERLVPDTRVQDKIIKELNLYKSAAGDFGRKMAIRARDNLLPSEWWSTYGGGCPNLSRLAIRILSQTSSVMFCKRNQIPFEQIINTRNWIERQHLTDLVFVHYNLRLRQMFTSKEQESNDPLSFDNIYNVEDWIRPRDLYQEYGNSDWMALDSSSINTMLLRPLNNEPEEMCEGFDDQEIFMSLKNGEDEHI 762
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01914 762 Pfam Protein of unknown function (DUF 659) 237 388 IPR007021 -
Trre5g01914 762 ProSiteProfiles Zinc finger BED-type profile. 12 70 IPR003656 GO:0003677
Trre5g01914 762 SUPERFAMILY Ribonuclease H-like 295 677 IPR012337 -
Trre5g01914 762 PANTHER OSJNBA0013A04.12 PROTEIN 28 679 - -
Trre5g01914 762 Pfam hAT family C-terminal dimerisation region 587 675 IPR008906 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01914 Trre-Chr5 14252770 14255664 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01914 - - tpra:123918230 1441.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01914 5 14252770 14255664 Trre5g01914 5 14252770 14255664 ECH