Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01864 ATGGGAAACGCTATGGGAAGAAACAAAAAAGCAAAGGTAATGAAAATAGACGGAGAAACCTTCAAGCTAAAAACACCTGTTAGAGCAAACGACGTCGTTAAAGACTATCCCGGTCATGCTCTTTTAGAGTCACAAGCGGTTAAACATTTTGGCCTTCGGGCGAAACCACTTGAACCAGATCAAGAACTAAAGCCCAAGAAAATATACTTCTTGGTTGAGTTACCCAAACTTCAGCCCCAAAAAAAGCCCGAACCATCACCGAGGAGGGTGCGATCCAGTGGTATACGTGGCATGAATGCTACAGAGCGACTCGATTTTTTGATGTTATCGAAACGCTCCGTTTCAGACTTATCTTTGGTGAACCGGTCCAATTTGGGTGGCGCGCCTGGTTTAGTTCGTGATGGGTCCACAAAGGTGAAAATGAGACTTCCGAAAGCCCAATTGGAGAAGTTGATGGAGGAGAGTCATGATGGAGCCGAGGTGGCGGAGAAGATTGTGAGTTTGTATAGGGAGAGTAATGTTGCCGTGAAGGGTGGTAGTATAATAAATGTAGACAAAATTGAGCTTCACAATCAAAGGTCACAAAGGAAACGAGTGTGTTTCAGCCCAGTGGAAGAAGGAGAAATTCATGAAGAAGCAGCTGCTCAATAG 651 0.447 MGNAMGRNKKAKVMKIDGETFKLKTPVRANDVVKDYPGHALLESQAVKHFGLRAKPLEPDQELKPKKIYFLVELPKLQPQKKPEPSPRRVRSSGIRGMNATERLDFLMLSKRSVSDLSLVNRSNLGGAPGLVRDGSTKVKMRLPKAQLEKLMEESHDGAEVAEKIVSLYRESNVAVKGGSIINVDKIELHNQRSQRKRVCFSPVEEGEIHEEAAAQ 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01864 216 Pfam PADRE domain 1 158 IPR025322 -
Trre5g01864 216 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01864 Trre-Chr5 13880502 13883123 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01864 - - aprc:113849873 279.641
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01864 5 13880502 13883123 Trre5g01864 5 13880502 13883123 ECH
Trre5g01864 5 13880502 13883123 Trre9g04193 9 49686642 49689410 ECH
Trre7g01891 7 14771183 14772641 Trre5g01864 5 13880502 13883123 ECH
Trre9g04193 9 49686642 49689410 Trre5g01864 5 13880502 13883123 ECH
Trre5g01864 5 13880502 13883123 Trre9g04193 9 49686642 49689410 PCT