Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01862 ATGGCTTCTCCAACTCACAATTGGAGGACTCAAAAAATTACACTAGTGCTACTTATTATTTGTATTTCATTTTCCTCTTCATTTGAAGAAACTATAATAACATCTCCAAAGAAGTTAGATTATCCAGTGGTTGATCAGCCAACAGAATATGCCGAAATCAAGTGCGGATCATGTCCTTGTGGATCTACGTGTGGTGACCAATCTCCTCCGCGTCCACCTCCATCTCCGCTACCTCCTTGTCAACCACCAACACCACCACCTCCTCCACCACCACCACCACCTCCTCCACCATCACCACCTCCGCCTCCCAAGTGCCCTCAAAATTGTAACCCCTTGCTACCACCGCCTCCACCGAGATTCATATATGTGCCGGTGCCAGGTCAGGTAAACCAACCTAAACCATATTGGATATATTATTACTCTGGAGCTGAAAACAGAGTTGTGAATTTTCTGGTTTTAGCTTTGGGAGGAGGACTAGTAATTGCAACGGTATTTGGATGA 501 0.4531 MASPTHNWRTQKITLVLLIICISFSSSFEETIITSPKKLDYPVVDQPTEYAEIKCGSCPCGSTCGDQSPPRPPPSPLPPCQPPTPPPPPPPPPPPPPSPPPPPKCPQNCNPLLPPPPPRFIYVPVPGQVNQPKPYWIYYYSGAENRVVNFLVLALGGGLVIATVFG 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01862 166 MobiDBLite consensus disorder prediction 66 108 - -
Trre5g01862 166 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 2 1 88 - -
Trre5g01862 166 PRINTS Proline rich extensin signature 111 127 - -
Trre5g01862 166 PRINTS Proline rich extensin signature 67 79 - -
Trre5g01862 166 PRINTS Proline rich extensin signature 85 106 - -
Trre5g01862 166 MobiDBLite consensus disorder prediction 62 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01862 Trre-Chr5 13867181 13867681 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01862 - - gsj:114381752 65.855