Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01793 ATGTCACTTTCATGTGGGGTCGAATGCGTTTTCGTCCTCGGCTGTGCACGTTGGTTATGGAAACGTTGCACATACATCGGCTCTTACGATAGTGCCACGTGGCCATCCGCCACCGCCGTCGAATTCGAATCAGTGCCACGTGTCTGTCGAGTCATTCTCGCTATCTACGAACCCGATCTTCGCAACCCACAAAACTATATACCTGCTAATGGGTACCGTTTGAATCCTGATTGGGTTATAAAGCGCGTGACTTATGAAGAAACTCAAGGTCACGCGCCGCCGTATATAATCTACGTTGATCATGATCATCGCGAGATTGTTATGGCGGTGCGTGGTTTGAATTTAGCTAAAGAAAGTGATTATAAGACTTTGTTGGATAATAAATTAGGACAACAGATGTTTGATGGTGGTTATGTTCATCATGGGTTGTTGAAATCTGCTGTTTGGTTGTTGAATAGGGAATCTGAGACTTTGAAGAGTTTGTGGATTGAGAATGGTTCTGAGTATGGGATGGTTTTTGCTGGACATTCTTTAGGGAGTGGTGTTGTTTCTTTGTTGAGTATTCTTGTTGTCAATCATAGGGAACGTTTGGGTGGGATTTCTAAAGACAAGATTAGGTGTTATGCTATTGCTCCTGCTAGATGTATGTCGCTTAATTTGGCTGTTAAATATGCTAATGTTATTCATTCCATTGTGTTGCAGGATGATTTTTTGCCAAGAACGGCCACTCCATTGGAAGATATATTCAAATCAATATTCTGCTTGCCCTGCTTATTATTCTTGGTTTGCTTGAGGGACACCTTCGTACCCGAAGATCGAAAGCTGAGAGATCCAAGGAGACTTTATGCACCTGGACGAATGTACCATATTGTTGAAAGGAAATTTTGCAGATGTGGGAGATTTCCTCCGGAAGTGAGGACGGCTATTCCTGTCGATGGAAGATTTGAGCATATTGTCTTGTCGTGCAACACAACAGCAGATCATGCAATTATTTGGATTGAAAGGGAAGCAGAGAAAGCCTTACAATTAATGAAGGATCAAGAAAACTCCAAAACTGTGACAGTCGCTCCAACAATACAAAAGTTTGAGAGATTGAAAACCATAGAAAAAGAACATAAAGATGCTTTGGAAAGAGCTGTTAGCTTAAATGTACCTCATGCAGTAGACAGTGCCGAGGAAGAACATCTCGAAAACAACGGTGAGGGATCCAGTAATAATGGCGACAAAGAAGCTGCTTCAAGTACTGAAACGAAACCAAGTCGTGGAAGATTAACCTGGGAAGAGGTTGTCGAAAAGCTGTTGAAGAAAAATGAAACCGGAGAAAAACACATTGAAGAGGATACAAATGCCCCACATTGA 1359 0.4202 MSLSCGVECVFVLGCARWLWKRCTYIGSYDSATWPSATAVEFESVPRVCRVILAIYEPDLRNPQNYIPANGYRLNPDWVIKRVTYEETQGHAPPYIIYVDHDHREIVMAVRGLNLAKESDYKTLLDNKLGQQMFDGGYVHHGLLKSAVWLLNRESETLKSLWIENGSEYGMVFAGHSLGSGVVSLLSILVVNHRERLGGISKDKIRCYAIAPARCMSLNLAVKYANVIHSIVLQDDFLPRTATPLEDIFKSIFCLPCLLFLVCLRDTFVPEDRKLRDPRRLYAPGRMYHIVERKFCRCGRFPPEVRTAIPVDGRFEHIVLSCNTTADHAIIWIEREAEKALQLMKDQENSKTVTVAPTIQKFERLKTIEKEHKDALERAVSLNVPHAVDSAEEEHLENNGEGSSNNGDKEAASSTETKPSRGRLTWEEVVEKLLKKNETGEKHIEEDTNAPH 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01793 452 Gene3D alpha/beta hydrolase 35 252 IPR029058 -
Trre5g01793 452 SUPERFAMILY alpha/beta-Hydrolases 38 243 IPR029058 -
Trre5g01793 452 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 1 447 - -
Trre5g01793 452 CDD Lipase_3 41 240 - -
Trre5g01793 452 Pfam Lipase (class 3) 107 242 IPR002921 GO:0006629
Trre5g01793 452 Pfam Lipase 3 N-terminal region 7 64 IPR005592 GO:0016042
Trre5g01793 452 MobiDBLite consensus disorder prediction 400 420 - -
Trre5g01793 452 MobiDBLite consensus disorder prediction 390 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01793 Trre-Chr5 13317797 13321642 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01793 1 343 Miscellaneous Gene Families AT5G37710 76.093 0.0 568
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01793 - - gmx:100798831 718.768