Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01755 ATGTCATCGCATGGGAACGATCCACGTCAGCCATCGGCGGCAAAACCATACGTAGCTCCGGTGATTGCTCCACAAGACCTTCCGATCGATTACTCCGGTTTCATCGCCGTGATATTCGGCGTCGCTGGCGTTATGTTCAGGTATAAGCTGAGTTCGTGGTTAGCTCTCATATTCTGTGCGCAATCCATTGCTAACATGAGGAATGTCGAAAATGATCTCAAACAAGTTATGATGGCTATGATGTTTTCTTTCATGGGATTGATGACAAACTACTTTGGACCTTCTAGACCCGGTCCCAAGCAAAGCTGA 309 0.4725 MSSHGNDPRQPSAAKPYVAPVIAPQDLPIDYSGFIAVIFGVAGVMFRYKLSSWLALIFCAQSIANMRNVENDLKQVMMAMMFSFMGLMTNYFGPSRPGPKQS 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01755 102 Pfam PAT complex subunit Asterix 6 97 IPR005351 GO:0005789|GO:0044183|GO:0045048
Trre5g01755 102 PANTHER CGI-140 2 99 IPR005351 GO:0005789|GO:0044183|GO:0045048
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01755 Trre-Chr5 12896234 12899761 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01755 K24963 - gmx:100500245 180.259
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01755 5 12896234 12899761 Trre5g01755 5 12896234 12899761 ECH