Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01748 ATGGTGCAGAAACGTCCGTTTGATGCTGCTGAGGAAATGCTTGAGGTGTCCTTCAAACACCCCAAACATGCAGGCTCCAGCGATATTCTTGTACCGCTATCAGATTCTGTTATTCCGGATGATGATTGCTACACCCATTTGCCAAAAACTTCAGAGGAAGGATATGCACAAGGTAGTAGCGATTGTAAAGAAAAGCTTGCTGGCGAAAGTTGTGATGGACTTCCTAGAGGGGCTGCGAACTCTGAACCGAGGTTTCCTGTGATACGTATTCCAGCATCTTCTTGGACCACCAGTCGCCCTACCGAAGAAGATCACCATTCAGAACCACCTATACATCTTCCTCTTTTTCCTGAGTACTTCAGTCCAGAACGGCCAATATATTTCAGTCCAGAACGACCCATAAGGACATTTACTCGCTATGAGGACCTCTATTCCATTCTTCTGGAACACTCTCCTCGCAAGCCTGTATGTGTTGGAGCTGATCATCAAGCTGAAGTTCCCCCATGGGGGTTTTCTGGTACTACTGTTTGGGATGAAGATGAAGCTGAAAAGAGATTGATGGGGACTTGTATAATCCCTATGCCTGATATGGAGTTACCTAGCTTTGATGATGAAGTTGGAAAGGGAAGAACTGATTGTAGCTGTGATGACAGGGGATCTATGAGATGTGTAAGACAGCATATAATGGAAGAAAGAAAGAAATTATTAAAAACCTTTGGGATTGAGAAATTCATTGGATTGGGGTTTGCTGGCATGGGAGAACAAGTGGCTGAAAAGTGGTCTCCAGAGGATGAACATCTATTTCACAAGGTTATCTTCAATAATCCAGCTTCCCTCAACAAAAATTTCTGGAACTATCTTTCCATTGTGTTTCCCTCTCGAACCAAAAAGGAGATAGTGAGTTACTACTTTAATGTCTTCATGCTACGAAAGCGGGCAGAGCAGAACAGGAACCATCTATTAAATGCTGATAGTGATAATGATGAATGGCAAGGTAGTGACGACAATGAAATTGGTAACCATGACGAAGATGAGGATTCTGTTGCTGAATATCCCATCTATCAAGATGATAATAACTGCAATGATAATCATATGGAGGATTATGATGACGAGTTTGCTGAAGATGAAACTTGCGATGTTAATGGAATTGCAGATCATACCAAGAGCAACATTGATGATGATTCTAAGTATGATCATGTCGAGATGCATCACTCTAGCTCCCCTCCTCTGAATCAACCCGAGGATCAATCTGTTTGGCAGGATTCATGTGATGAAAAAGTTAAACATGATCCATACACATCACATGACATGGGAGTTGCTTCAAGGGAAATCAAGGTGAAGAGTGGGAATGGTGATAATTGGTGCAGTAACTATAACGGATTAAGCAACGGTTACAGCCAAGGATATGTGTTGGAGCCTTGTGATGCACCAGGTTGGGATTCTGGCTTTGTTTCTTGCTCTAAAAATAAGATTGACTTTTTACCAACATGTAGCATGATAGAAGAGGTTTTTGGAGATGGAAGAAGGCAAGACATGAGAAGAGCATGA 1548 0.4218 MVQKRPFDAAEEMLEVSFKHPKHAGSSDILVPLSDSVIPDDDCYTHLPKTSEEGYAQGSSDCKEKLAGESCDGLPRGAANSEPRFPVIRIPASSWTTSRPTEEDHHSEPPIHLPLFPEYFSPERPIYFSPERPIRTFTRYEDLYSILLEHSPRKPVCVGADHQAEVPPWGFSGTTVWDEDEAEKRLMGTCIIPMPDMELPSFDDEVGKGRTDCSCDDRGSMRCVRQHIMEERKKLLKTFGIEKFIGLGFAGMGEQVAEKWSPEDEHLFHKVIFNNPASLNKNFWNYLSIVFPSRTKKEIVSYYFNVFMLRKRAEQNRNHLLNADSDNDEWQGSDDNEIGNHDEDEDSVAEYPIYQDDNNCNDNHMEDYDDEFAEDETCDVNGIADHTKSNIDDDSKYDHVEMHHSSSPPLNQPEDQSVWQDSCDEKVKHDPYTSHDMGVASREIKVKSGNGDNWCSNYNGLSNGYSQGYVLEPCDAPGWDSGFVSCSKNKIDFLPTCSMIEEVFGDGRRQDMRRA 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01748 515 MobiDBLite consensus disorder prediction 322 344 - -
Trre5g01748 515 MobiDBLite consensus disorder prediction 399 420 - -
Trre5g01748 515 PANTHER DNA BINDING PROTEIN 1 509 - -
Trre5g01748 515 CDD SANT 259 307 IPR001005 -
Trre5g01748 515 MobiDBLite consensus disorder prediction 90 110 - -
Trre5g01748 515 MobiDBLite consensus disorder prediction 44 63 - -
Trre5g01748 515 MobiDBLite consensus disorder prediction 328 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01748 Trre-Chr5 12818642 12820300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01748 - - aprc:113873168 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01748 5 12818642 12820300 Trre5g01748 5 12818642 12820300 ECH