Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01706 ATGCCTAGGGTTCCGACGAATCCCATTTCTTCTCCTCTTCCTTCATCTTCAATGGCTTCCATCATCAAAGCTTATTCACTTCCTGCTATTCTCTTCGCCGCAGCCATGTTCTACCAGCTCTTTCTTATTCCCAATGCTTTCCCTCCTTCTCATTATGACGTTCTGCAAATTGAGAGATATAGTTCGATTGATAAAGTAAAAGAAGCTTATGTTAATCTTGAAACTAAATGGAATTCGGATGTGGAAGTATTCGATGTTCATGAATTTTTAAAGATTCGATATGCCTATGAGTTGCTGACTAATCCTTTATGGAAAAGAGATTATGACTTATTCGGCATTGATGAACAACTTCATATCATTGAGAGTGCCAACAAGCGTTATGCAGGGAAAAACATTTCAGAATTGGACTTCCCTTTACTACACCCCCCTTCCTCCGAGTCTATTGATCATTCTGGTAAAGTCATTACTTCAAGTGATTTCCAGTCTATACTTCCAGATGCAAAGCCATGGCTAATTCAGCTGTATTCATCGGGGAGCAATCATTGTGCTGAGTTCTCCAAGTCCTGGAATAAAATAGGTTCTTTATTGGATTCATTTGCAAATACTGGTATGGTGGAACTTGGTGAGAAGGTCTCTATTTACTTTGCTGATAAAAGATCAACAGGAAAACCCTTTTTCCGAAATGGAATTCCATCTCTTTTTGCCATTCCTGCTGGATGTCAAACTGCAAAATGTTTTAGAAGGTTTGATGGTGAGCTTACGATCGACAAGGTTACAAATTGGTTTGCAACAACTGTATTGGCTTTACCTCAAATTAACTACTACACAAAGGAGTCATTGGTGCCAAGTTTTTTTGGAAAGAGTAGTCATCATAAGGTGAAAGTCATATTTTTTTCAAAATCTGGGGAACGTGCTTCTCCATTTATGCGACAAGTAGCAAAAGACTATTGGGCTTATGCTTCATTTGCATTAATTCTCTGGCGCGAAGAGGAATCATCCTATTGGTTGGAGGCATTTGAGGTGGAATCTGCACCTGCTATAGTATTTCTTAAAGGCCCGGGTGTTAAACCTGTTGTGCACCATGGTTCAGTTAACAATTCATTGTTTTTGAGTATGATGGAAAATAATAAAGAGCAAGAACTACCACAGCTAAGGAGCGTGACATCAATGGAACTAGGCTGTGATCCCCGTGGTTATTCTCGTGCTGGATATGATACAATTATTTGGTATTGTGCCATTGCAGTGGGAAGGCCAAGTATGGAATTGAACGGAATGCGTGAAACTATTTGCAGGGTTCAAGAAACATTATCTAAGCAAAGTGAGGTAGATGCATCATCTGAAAATCAATCCTTGGCTCCAGTTGTGGATGCATTTAAAAGAAAGCGCTTGACATTTGCTTGGCTTGACGGTGAAAAGCAGAAGGACTATTGTCAATTTTACCTTGGTGAGGGGGCAAGCGAAGGCACTTGTGGACAACGGAAGGGTATGAATGATATTCCTCGGTTGCTTGTTATTCGTTACCTAAGGAATAGTAGTGCTATTGATACGAGGACACAGGAAATTTCAAAGTGGAAATCATTACTGGTCCAAGATTTACTTGATGATTCCGATCAGGCAGGCCAATTTGTAGCTGGGTACAAGGGCGCGGCTGATGTTTCAGAGATAACCCAGTGGCTTGCAAATATAATAAAAGATGGTGACTCTAGAGATTTGCCTTTCTTTACACTAAGAACTCCTAAGCTTGTTCCAGATGACACAGAACCTATTTGGTCTAAAACTGCACAACAGATTCCATTAAAAAATATTATGCAGCATATTCTTGGCATTGTTGGTGGACTCTCTGTGTACCTTGATGATCCGAGAATCGGTCCTTTTCTTCTTTTGGCAGCCTTAATTTCTCTGGGCACCGTATGGCTGAGAAGAAGCCATCAAGTTAATCTATCCGAGTCAAAACAAGCAACTCAACCTAGTTCCGCGGAGCCGCCCTCTGGTGATGAAAGAAAACCGAAACCGAATGAGCGGGTCCGGAGACGGTCTGGTAAAAATGCACCCCCTTCTATGACAGATTCAGAACCACCGAATGCTTACCAGATGCCACTTTCAGACTCTGAATCTGATTAG 2121 0.4107 MPRVPTNPISSPLPSSSMASIIKAYSLPAILFAAAMFYQLFLIPNAFPPSHYDVLQIERYSSIDKVKEAYVNLETKWNSDVEVFDVHEFLKIRYAYELLTNPLWKRDYDLFGIDEQLHIIESANKRYAGKNISELDFPLLHPPSSESIDHSGKVITSSDFQSILPDAKPWLIQLYSSGSNHCAEFSKSWNKIGSLLDSFANTGMVELGEKVSIYFADKRSTGKPFFRNGIPSLFAIPAGCQTAKCFRRFDGELTIDKVTNWFATTVLALPQINYYTKESLVPSFFGKSSHHKVKVIFFSKSGERASPFMRQVAKDYWAYASFALILWREEESSYWLEAFEVESAPAIVFLKGPGVKPVVHHGSVNNSLFLSMMENNKEQELPQLRSVTSMELGCDPRGYSRAGYDTIIWYCAIAVGRPSMELNGMRETICRVQETLSKQSEVDASSENQSLAPVVDAFKRKRLTFAWLDGEKQKDYCQFYLGEGASEGTCGQRKGMNDIPRLLVIRYLRNSSAIDTRTQEISKWKSLLVQDLLDDSDQAGQFVAGYKGAADVSEITQWLANIIKDGDSRDLPFFTLRTPKLVPDDTEPIWSKTAQQIPLKNIMQHILGIVGGLSVYLDDPRIGPFLLLAALISLGTVWLRRSHQVNLSESKQATQPSSAEPPSGDERKPKPNERVRRRSGKNAPPSMTDSEPPNAYQMPLSDSESD 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01706 706 ProSiteProfiles dnaJ domain profile. 50 112 IPR001623 -
Trre5g01706 706 MobiDBLite consensus disorder prediction 646 661 - -
Trre5g01706 706 MobiDBLite consensus disorder prediction 663 680 - -
Trre5g01706 706 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 16 19 706 - -
Trre5g01706 706 Pfam DnaJ domain 51 109 IPR001623 -
Trre5g01706 706 CDD DnaJ 51 101 IPR001623 -
Trre5g01706 706 SUPERFAMILY Thioredoxin-like 153 265 IPR036249 -
Trre5g01706 706 Gene3D DnaJ domain 48 127 IPR036869 -
Trre5g01706 706 SUPERFAMILY Chaperone J-domain 40 112 IPR036869 -
Trre5g01706 706 Gene3D Glutaredoxin 150 268 - -
Trre5g01706 706 MobiDBLite consensus disorder prediction 683 706 - -
Trre5g01706 706 MobiDBLite consensus disorder prediction 646 706 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01706 Trre-Chr5 12463109 12472909 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01706 - - gmx:100820244 1129.78