Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01702 ATGGGGCTAATAGATCTGGAAAAGCACTTTGCATTCTTCAGAGCTTATCATAGAAACCCAATAAACGTAACAATCCATATAATCATTATTTTGCCTCTCTTTTTCAGTGCTCTTATTCTACTTTACTTCACACCTCCTATTTTCACCCCCTCCCAAACACTCCTTAATTATATACACCCTGTTCTTGTTTTCAACCTTGGTTTCATCGTTGCTGTTTTCTACGCTCTCTTTTATGCTGCTTTGGATATTAAAGCTGGTTCTTTTGTAGCTGTTTTCATTTTTCTTGGTTGGGTTTCTTCTAGTTTCGTCGCTAATTCACTAGGCTTCGAACTCGCTTGGAAGGTTGTGTTGGCTACTCAGTTGATTTCTTTGATTGGAGGGTCTATTGGACATGGTGCGTTTGAGAAACGTGCACCAGCATTGGAAAACCTTGGTCATGTTCTTGTAATGGAACCTTTCTTTGTGATTCTTGAGATCCTTCAATCAACCATTGGATATGAACCATATCCTGGATTTCAGACTAAAGTGAAGGCAAGGATAGAAGCTAACATCAAAGAATGGCAAGACAAGAAACAAAAGAAAAATTCTTAG 591 0.3841 MGLIDLEKHFAFFRAYHRNPINVTIHIIIILPLFFSALILLYFTPPIFTPSQTLLNYIHPVLVFNLGFIVAVFYALFYAALDIKAGSFVAVFIFLGWVSSSFVANSLGFELAWKVVLATQLISLIGGSIGHGAFEKRAPALENLGHVLVMEPFFVILEILQSTIGYEPYPGFQTKVKARIEANIKEWQDKKQKKNS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01702 196 PANTHER DUF962 DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_8G05310) 1 195 IPR009305 -
Trre5g01702 196 Pfam 2-hydroxy-palmitic acid dioxygenase Mpo1-like 5 162 IPR009305 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01702 Trre-Chr5 12439402 12441919 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01702 - - vra:106756786 232.646
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01702 5 12439402 12441919 Trre5g01702 5 12439402 12441919 ECH