Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01699 ATGGCCGAAGCTATAATTGGTTTCACTGTTTTCAATTCACATATTCATAGTTCATGTCTTCAAACTAAAAGATTTGCATCTTCAAGATTGCCTAAGCGCACTTCAAATTCTACCCTTTTTCACAGGTCATTGCAGGTCTTAGATGGCAAGACAAAAAGAGCATCTTTGTGTAAAGTGAATGGTTTACCAGATATTCCACTAATGGCAATTCTAGTAGAACAATTGGAAGGACAAAGAGATCTTATAACAGAGAAAACAATTTGGCATCTTAGTGATCAACAAATAAAGAATGTCTATGCTTGGTACATAATGTTCACCGTTTGGGGAGTCTTATTCTTTGGTTCCATGAAGGACCCATACTACGATTCAGAGACATATAGGGAAGATGGAGGAGATGGCACAGGAAACTGGATATATGAAAAGCAAGAGGTAATGGAAGCAGAGGCCAGAGAAGCTCTATGGAGAGAGGAGTTGATTGAAGAAATAGAACAAAAAGTTGGAGGGTTAAGAGAAATTGAAGAAGCAGCAAAGAAGGAGGAGGAACTTGTTAAATGA 555 0.3802 MAEAIIGFTVFNSHIHSSCLQTKRFASSRLPKRTSNSTLFHRSLQVLDGKTKRASLCKVNGLPDIPLMAILVEQLEGQRDLITEKTIWHLSDQQIKNVYAWYIMFTVWGVLFFGSMKDPYYDSETYREDGGDGTGNWIYEKQEVMEAEAREALWREELIEEIEQKVGGLREIEEAAKKEEELVK 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01699 184 PANTHER PHOTOSYNTHETIC NDH SUBUNIT OF SUBCOMPLEX B 4, CHLOROPLASTIC 1 181 IPR034570 GO:0009535|GO:0009773|GO:0010598
Trre5g01699 184 Coils Coil 155 179 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01699 Trre-Chr5 12422929 12425289 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01699 - - gmx:100800656 265.774