Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01683 ATGTCAGAGAAGAGTATGGTTCCGTCTAGGTTTATGTTTTGTGTGATGCTTATTTCTATGTTCCTTTTGGTCTTGTCTACCATTTTCCTACTTCAGTTTAGCAGCCATTCTTTGATACCTAGATCAGTTTTAGAGCTTATTATTGTTAATAACTCGTCGTTTTACTTTACGCCCGATTTCAAGAAGGAACAAATAATGCTTCCTACGTACCCTTCTGAGGATTTAAAAGTTCAAACGTTAAAACATAGAGATTCTGATTGGAAAGTTTCCAATTCAAGTCAGAAGAGAAGTTCTGTAGAACAGAAGAAAAAGAAGATGAATAGGGCATGTGATCCGACTCGAGCTCTGTTGAAAGTATTCATGTATGACTTACCTCCGGAATTTCACTTCGGGTTATTGGGTTGGAAGGGAAGTGTAAATCAAACGTGGCCAGAGGTGGATAACCCCAGCCGTATTCCACGTTATCCCGGTGGATTGAATTTGCAGCATAGTATAGAATATTGGCTCACACTTGATCTTCTATCATCAAACACTGCAAAAGCTGGTAAACCTTGTACTGCAATTAGAGTGCAGAATTCAAGTCAAGCAGATATATTTTTTGTGCCGTTTTTCTCGTCTTTGAGTTACAATCGGCATTCCAAGACTCAAGCGGAGGGACAAGTTAGCGTTAACAAAATGTTGCAAGACAGATTGGTACATTTCTTAAAGGGGCGGAAAGAATGGCAACGCTCGGGAGGGAAGAATCATCTAATTGTTGCCCATCATCCTAACAGCTTGTTGGATGCAAGAAGAGACTTGGCTTCTGCTATGCTCATACTTGCAGATTTCGGTAGGTATCCTGTTGAGTTAGCAAATATCAAGAAAGATATAATAGCTCCCTATAGACATTTGGTGGGTACGATACCAAGTGCTGAATCACCTTCATACGACGAGCGTTCCACGCTGGTGTATTTCCAGGGGGCGATATACAGGAAAGATGGAGGAGTTATTCGCCAAGAACTGTATTACCTCCTCAAAGATGAGAAAGACGTGCATTTTACATTTGGGAGCATAGGTGGAAACGGGGTTAATCAGGCAAGCCAGGGCATGTCCATGTCCAAATTTTGCCTTAACATTGCTGGAGATACTCCATCATCCAATCGTCTTTTCGATGCCATAGTAAGCCACTGTGTTCCCGTCATCATCAGTGATGAAATTGAGCTACCATTTGAAGATGTTTTAGACTACTCAGAGTTTTCCTTATTCGTTCGCTCCACCGATGCCATAAAGAAAGGCTACTTACTGAAGTTCCTTCGTTCAATCAAGCGCAAGGAATGGACCAAGATGTGGGAAAGATTGAAGGAGATTACACATCACTTTGAGTATCAATATCCATCCAAACCCGAGGATGCAGTGAACATGATTTGGCAAGAAGTTGCGCGTAAGATATCTTCAATGCAGTTCAATTCACACAGGAAGAACAGATACAATAGATCCAAGCGTCTCGTCAAGACTAACTGA 1500 0.414 MSEKSMVPSRFMFCVMLISMFLLVLSTIFLLQFSSHSLIPRSVLELIIVNNSSFYFTPDFKKEQIMLPTYPSEDLKVQTLKHRDSDWKVSNSSQKRSSVEQKKKKMNRACDPTRALLKVFMYDLPPEFHFGLLGWKGSVNQTWPEVDNPSRIPRYPGGLNLQHSIEYWLTLDLLSSNTAKAGKPCTAIRVQNSSQADIFFVPFFSSLSYNRHSKTQAEGQVSVNKMLQDRLVHFLKGRKEWQRSGGKNHLIVAHHPNSLLDARRDLASAMLILADFGRYPVELANIKKDIIAPYRHLVGTIPSAESPSYDERSTLVYFQGAIYRKDGGVIRQELYYLLKDEKDVHFTFGSIGGNGVNQASQGMSMSKFCLNIAGDTPSSNRLFDAIVSHCVPVIISDEIELPFEDVLDYSEFSLFVRSTDAIKKGYLLKFLRSIKRKEWTKMWERLKEITHHFEYQYPSKPEDAVNMIWQEVARKISSMQFNSHRKNRYNRSKRLVKTN 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01683 499 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 24 470 IPR004263 GO:0006486|GO:0016757
Trre5g01683 499 MobiDBLite consensus disorder prediction 86 105 - -
Trre5g01683 499 Pfam Exostosin family 116 428 IPR040911 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01683 Trre-Chr5 12200661 12203398 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01683 - - gmx:100795371 807.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01683 5 12200661 12203398 Trre5g01683 5 12200661 12203398 ECH