Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01397 ATGATTCAATGGACGAAACAGTTGAATGCTGCATTTGGGTTCTCATTTCTTTGGCTAATTTGCTTGATTTACTTCACCCAGGGTTTTAGGTCTTTTGTCTGGACAGCAATTTCATATCATCTTAAAGATAATCTTAATTTGTCAGCCTCAGCTTCTCAATTTGTGTTTTCAGTTGCATTTTTCCCATGGAGTATTAAACCATTATATGGAATACTTTCTGATTGTATCCCAATTAAAGGAAGTAAACGGATTTCGTACTTGGTGATCGCAACTGTGCTCTCCCTTGTACCGTGGTTTATTTTAGGTTTAAGTTCAACCTTGAGGAACTCAACATGGCACCTGATGGTATTCTTGACTGTGCAAAACTTGGGATCAGCCATGGCAGATGTTGTTGTCGATGCAATGATAGCTGAGGCTGTAAGATATGACAAGGCCAAATTTGCAGGAGACCTCCAATCATTATCTTGGTTTTCAATGGCTGTGGGAGGAATATGTGGGAGTTTGTTAGGGGGAGTTGCGTTATCAAGATTACAGATATATACAATTTTTCTTCTATTTTCTGTACTACCTTGCATACAACTATTATCATGCAGTTTTGTGAAGGAGAACTCTGTAAATAGCGAAGTTTTAGTCGAGGATTCTATTGCAAATGATTTACATACAAATGGTAGTACTCTAGATGAAGATAGTTCCTTAACTAAAAAGTCACACAGCAGTACAAGAAAAAGAAAGAAGGGCAAAAAGAACCCAAAAAATAGATCAGTAAATACCAGCAAATCAAAGATTCTTGAGAAAGGAGACTCCTTGGCAACAAAGTGGTTCCATTCCTTGAAAAAAGCTATTTATGATTTGTGTCGTGCGTTTAGACAGCCAATGATTTTGAGACCTATGTCTTGGTTTTTCCTTGCCCACATTACTGTTCCCAATCTTTCCACAGTCTTATTCTACTATGAAACGGAAGTTCTAAAGCTCGAAGCATCGTTCTTGGGGACAGTACGCGTTGTTGGTTGGTTAGGACTTATGTTCGGAACCTTCATTTATAACCGTCACCTAAAGCGTATGACACTAAGGAGAATTCTCATGTGGGCCCATGTTGGTTTGGCCTTCTTGAATCTTCTACAGATTGCTGTTGTGTCTAGGAAAAATATTTCCTTTGGAATACCGGATAGGGTTATGGTGCTCTTTGGCTCGGCTCTTGTTGATGGAATCAATCAATTCAAGTTTATGCCTTTCCTTATTTTATCTGGACAACTATGTCCTCCAGGAATTGAAGGGACATTATTTGCTCTTTTCATGTCAATAAACAATTTGGGAACAACAATAGGGTCATTTGTAGGTGCTGGATTGGCTTCCATATTGAACATAGATTCAGGATCTTTTGACAATCTTCTGTTAGGAATTGTTATTCATGCTTTTTGCAATTTCATTCCAATTGCTTTTCTGTTTCTGATACCAAAAGAAGCAACAGGTTCATCATCATCATAG 1485 0.3805 MIQWTKQLNAAFGFSFLWLICLIYFTQGFRSFVWTAISYHLKDNLNLSASASQFVFSVAFFPWSIKPLYGILSDCIPIKGSKRISYLVIATVLSLVPWFILGLSSTLRNSTWHLMVFLTVQNLGSAMADVVVDAMIAEAVRYDKAKFAGDLQSLSWFSMAVGGICGSLLGGVALSRLQIYTIFLLFSVLPCIQLLSCSFVKENSVNSEVLVEDSIANDLHTNGSTLDEDSSLTKKSHSSTRKRKKGKKNPKNRSVNTSKSKILEKGDSLATKWFHSLKKAIYDLCRAFRQPMILRPMSWFFLAHITVPNLSTVLFYYETEVLKLEASFLGTVRVVGWLGLMFGTFIYNRHLKRMTLRRILMWAHVGLAFLNLLQIAVVSRKNISFGIPDRVMVLFGSALVDGINQFKFMPFLILSGQLCPPGIEGTLFALFMSINNLGTTIGSFVGAGLASILNIDSGSFDNLLLGIVIHAFCNFIPIAFLFLIPKEATGSSSS 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01397 494 MobiDBLite consensus disorder prediction 226 257 - -
Trre5g01397 494 Pfam BT1 family 27 487 IPR039309 -
Trre5g01397 494 PANTHER FOLATE-BIOPTERIN TRANSPORTER 1, CHLOROPLASTIC 3 490 IPR039309 -
Trre5g01397 494 MobiDBLite consensus disorder prediction 237 254 - -
Trre5g01397 494 SUPERFAMILY MFS general substrate transporter 17 487 IPR036259 -
Trre5g01397 494 Gene3D MFS general substrate transporter like domains 15 482 IPR036259 -
Trre5g01397 494 NCBIfam folate/biopterin family MFS transporter 19 486 IPR004324 GO:0016020
Trre5g01397 494 CDD MFS_FBT 18 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01397 Trre-Chr5 9838746 9842266 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01397 - - cam:101505884 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01397 5 9838746 9842266 Trre5g01397 5 9838746 9842266 ECH