Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01394 ATGTCTTCCCTAACCCAACACAAGTACCTACCTAGCTTTCACCACCAAGTTTGTACAAAGGGAAAACTCGTCCACCGTATTCGCGTATATTGCTCCACCAATACCACGACTACTAGTACTACTACAACTACCCTGAAGTCTAAGCCCAATGTCAATCAATTGATCATTGAGCCCAAACTTGCACAACCGCCAATTAAGGTTGTAACTGCCGCTAACCGTACAAGGGATAGTGACACAAGTTTGCAATCAACATGGTCTCATCGTGCATGGGTGGCGGTTGGTTGCACAACTTTGCTAATTTCTTTGGGAGAGTCCATAAAGGGTTCGGTGGATATGAATATGTGGGTTGAGCCTATTTTAGCAGGATGGGTTGGTTACATCTTGGCCGATCTTGGGTCCGGGGTTTACCATTGGGGCATTGATAATTATGGGGATGGATCAACCCCATTAGTTGGAGCCCAAATTGAAGCTTTCCAAGGCCATCATAAGTGGCCATGGACCATTACTAGGCGCCAATTTGCTAACAATTTGCACGCACTCGCACGTGTGGTGACTTTTGTAGTGCTTCCTATAGATCTTGTTTTCCATGACCCCATAGTTCAAAGTTTTGTTGCGGTTTGCGCTGGTTGCATTATGTTTAGCCAGCAATTTCATGCATGGGCTCATGGGACAAAGAGTCGGCTTCCACCGCTCGTGGTTGCTTTACAAGAGAGCGGAGTGCTCGTGTCACGGTCGCAACACTCAGCACACCATCGGCCACCGTATAACAATAATTATTGCATAGCCAAGGTCATGGAGTGA 801 0.4669 MSSLTQHKYLPSFHHQVCTKGKLVHRIRVYCSTNTTTTSTTTTTLKSKPNVNQLIIEPKLAQPPIKVVTAANRTRDSDTSLQSTWSHRAWVAVGCTTLLISLGESIKGSVDMNMWVEPILAGWVGYILADLGSGVYHWGIDNYGDGSTPLVGAQIEAFQGHHKWPWTITRRQFANNLHALARVVTFVVLPIDLVFHDPIVQSFVAVCAGCIMFSQQFHAWAHGTKSRLPPLVVALQESGVLVSRSQHSAHHRPPYNNNYCIAKVME 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01394 266 PANTHER FATTY ACID DESATURASE 4, CHLOROPLASTIC-RELATED 1 261 - -
Trre5g01394 266 Pfam Lipid desaturase domain 126 262 IPR019547 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01394 Trre-Chr5 9817280 9818166 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01394 K20417 - gmx:100793638 403.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01394 5 9817280 9818166 Trre5g01394 5 9817280 9818166 ECH