Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01390 ATGAAGCGCAAACGCGGTCGCCCACGAAAATACCCAAGGCCAGATGCAGAGGAGAGTTCCTATATGCTACTTAATCAAAGCAGAAAGCAGACTCCTGTTCGTGCTGAACAAGCCCCAGTACCTCCTGGATTTCAAGCAGTTAACGGAAATCAACACGTTCAAAGTGGTCAAGAAAGTGAATCAAACCCAAACAATTCAATGGTCGGCCAGGTTGTTACTGGTGTAATTGAGGCAGTATTTGATGCTGGGTTTTTGCTCAGTGTTAGAGTTGGTAATTCTGATACTACTTTGAGGGGACTAGTCTTCAAGTCTGGACATTTTGTTCCTGTTTGCCCTGAGAATGATGTGGCTCCAGGTGTTCCAATGATCCACAGAAATGAGGTTCCCTTCCCTTCTAGACCTACTCAATTTCAAACTCCTCTCCCAAAGGAAAAGAATGGTCAACCAGCGAGTGTTTCTAGGATTGAAACCCTTCCAATGAATGGTTCACAATCTGCCCCTCAGGTTCCCAGAGGAGTAGTTAGTTCTAGTAACTTGGCTGTTGCTTCCAGAAACGTTCCTTCGGTGACTAGCCAAACCACTGATCAACTAGCCAGAGGTAATCCAGTACCTGTTTTGTTCCAACCTAGCTTTTCAAACGGGATGCCAGTTTCTACTCCGCCATCACAACTCACCCCAGTTTCTCTAGTGAGTGGAGTGAATATTGTGGGCAAGGAAACTCCGGTAGGTGGAAATCAAGTACTTCCCTCTCCTGTCCAAACTATTAGCCAGACTTCATTTCCGAGTAGAATGCAAAGTGAAGGCTTTCCTACGAATTATCAATCTTCTTCTGATGCGCTGAATAAAATCGAGGACAAATCATTACCGGTGGCTAGTGCACCTATTGAGAAACTGGTTACTGAAGATGTTAAAAAGATCGAAACTCCACCAGTTGTCATGGATACCAAGACTGTAATCAGCATGCCAGGTGATAATATAGTGGCAAAGGATACCATCACTATGGAGGAAGACAAAGTCAATGACGTAGGTCAACCTGTTTTGATTCAGCCTCTGCACGCTGCACAGTCTCATGTTGAGGGAAATTCTGCTTCTGCTCCCATAGCTTCAAACTGCACTGAAACTGGCCAAATGACTGAGCTTTTGCAGAATAACAAAACAGAAAACCAGGAAACCAAAGCAGCAGAGACAGGATCCGAAGACAAGTTGAATGATATAGCGAGTTTTGGAACCGGACTTCAACATGATGGAACTGTTCATTCAACAAATCCTTTCTGA 1275 0.4439 MKRKRGRPRKYPRPDAEESSYMLLNQSRKQTPVRAEQAPVPPGFQAVNGNQHVQSGQESESNPNNSMVGQVVTGVIEAVFDAGFLLSVRVGNSDTTLRGLVFKSGHFVPVCPENDVAPGVPMIHRNEVPFPSRPTQFQTPLPKEKNGQPASVSRIETLPMNGSQSAPQVPRGVVSSSNLAVASRNVPSVTSQTTDQLARGNPVPVLFQPSFSNGMPVSTPPSQLTPVSLVSGVNIVGKETPVGGNQVLPSPVQTISQTSFPSRMQSEGFPTNYQSSSDALNKIEDKSLPVASAPIEKLVTEDVKKIETPPVVMDTKTVISMPGDNIVAKDTITMEEDKVNDVGQPVLIQPLHAAQSHVEGNSASAPIASNCTETGQMTELLQNNKTENQETKAAETGSEDKLNDIASFGTGLQHDGTVHSTNPF 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01390 424 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 1 402 IPR045881 -
Trre5g01390 424 MobiDBLite consensus disorder prediction 1 66 - -
Trre5g01390 424 MobiDBLite consensus disorder prediction 386 424 - -
Trre5g01390 424 MobiDBLite consensus disorder prediction 47 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01390 Trre-Chr5 9792886 9794540 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01390 - - cam:101507720 575.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01390 5 9792886 9794540 Trre5g01390 5 9792886 9794540 ECH