Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01366 ATGGTTAAGGGTTTGCACAGCCAAAACCTCCCCGCCGATGTAGCACAGGTTGTTGATCAGCTAGAGCGCCACTGCTTGGCTCCTGATGGATCTCTCATTTCCAAACCTCTCTATAACGATCTCCAACTCGCTAGAGAGGAAATGTGTAGGGAAAGACTTCGTTACTTAGAAGCCATGGCTATATATTCTGAGGCTATTGCAATGGTAGAAGAGTATCATCAAGCCATTTCTGTGTCTAGCATTGGAGGAATTAGGGATACTGGAGGTCTTTATCCGCAGTTCGGTTTGAGGAACTCTCCTCAGGTTTATCAGACATTAGAACATCAAATGGTTGTCGCTGAAGCGGCTCAACGATTGAGACTACCTCTTATTTCCAAAGATGGAGAAGTTCATGATGAAGAAATTGAAAAGCTAAGTGTAGTGTCTCGAAGCTCCCTTGACAGTACTAGCACCAGTGGTGTGATCAACTCAAGTATGAATTCTTCTAATTATACCACTCCAAGCAGCTCTGTTAGCGGGGTTAATTACTCTCTGGCTTCTATGGATCCAGTGGAACCTGGAGTTGGCGGTGTTCCGAATCGTTTTCTTGGAATTACACCTGCTTATTTGTGGCAAACCCAGCATCAACAAACACCATTATCTGTGGATATGACAGAATATCGCATGTCTCTATCGCGTGAAGTAGATGCTCGCTTGAAAATGAAATGCGACAAGTTATCAAATGCCTTTGTATTGGATGACAATGATTCATCATCTGGAAGTCAAAGTTCAACTTCACGGCTTCCTGAAAGGGTGAAGTTGTTGATTGAGGAAATTGAAAGAGAAGAAACAGCACTGAGGGATGACCTTTATTCTGCTGATAGAAAATTTGCTGAATATTATAGTGTATTGGAGCAGATACTTGGGGTGCTCATTAAACTTGTCAAAGATTTGAAGTTGGATCATCAACATAAATATGATGAGCTGCAGAAAACATGGCTCTGTAAAAGATGTGAGACCATGAGTGCAAAATTGAGGGTTCTAGAAAATGTTCTCCTCCTCGGAACTTACACGAAGGAGTCTATACCTGCCCTTCATAAGATTAGGAAGTATCTCGTTGAGGCCACTGAAGAGGCTTCTATTGCATATAATAAAGCGGTTACTCGTCTGCGTGAGTACCAAGGCGTCGATCCTCACTTTGACGACATTGCAAGACAGTACCACGACATTGTAAAGAAATTGGAGAACATGCAATGGACAATTGACCAAGTTGAAATGGATTTGAAACGTATGTCGGATAGTGCTACCACATAG 1293 0.4238 MVKGLHSQNLPADVAQVVDQLERHCLAPDGSLISKPLYNDLQLAREEMCRERLRYLEAMAIYSEAIAMVEEYHQAISVSSIGGIRDTGGLYPQFGLRNSPQVYQTLEHQMVVAEAAQRLRLPLISKDGEVHDEEIEKLSVVSRSSLDSTSTSGVINSSMNSSNYTTPSSSVSGVNYSLASMDPVEPGVGGVPNRFLGITPAYLWQTQHQQTPLSVDMTEYRMSLSREVDARLKMKCDKLSNAFVLDDNDSSSGSQSSTSRLPERVKLLIEEIEREETALRDDLYSADRKFAEYYSVLEQILGVLIKLVKDLKLDHQHKYDELQKTWLCKRCETMSAKLRVLENVLLLGTYTKESIPALHKIRKYLVEATEEASIAYNKAVTRLREYQGVDPHFDDIARQYHDIVKKLENMQWTIDQVEMDLKRMSDSATT 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01366 430 PANTHER AUGMIN SUBUNIT 4 FAMILY MEMBER 3 422 IPR029327 GO:0051225|GO:0070652
Trre5g01366 430 Pfam HAUS augmin-like complex subunit 4 184 419 IPR029327 GO:0051225|GO:0070652
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01366 Trre-Chr5 9552623 9558855 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01366 K16587 - gmx:100786070 697.197
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01366 5 9552623 9558855 Trre5g01366 5 9552623 9558855 ECH