Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01349 ATGGAGAAATTGAGAAAAGTGGTAAATGAGATAGCTTATACTAATAATCTCAATAAACTATCTCCACTTCATCTCTCTCTTCTCCCTTTCCTTTCAATTTCCTCAGCTTTCTACAAACTTGCTCTCTCACTTCGCCACTTTCTCTACAAACATCGCTTCTTTCAATTTCAAATCCACCATTTGCCAGTTCCTGTTATCAGCGTTGGAAATTTGACATGGGGAGGTAATGGAAAGACGCCAATGGTTGAATTCATCGCTCTTTACTTTTCTCATTGCGGAATTTCACCTCTTGTTCTTTCTAGGGGCTATGGGGGTGGTGATGAAGTTAACATGCTTCAGAGGCATTTACTTGGAACGCCAGCTAAGTTTGGTGTTGGTGCGAATCGAGCTGCTGTTGCAAATCATTTGATCAAAAAATATGGTTACATTGATATTTGCAAGAATTCATTGTATGAGAAGCAAAACCTTGACCAGAAGGACCAGAATTCTCGTGATTCAGAAAAAATCGGGGTTATAGTTCTCGATGATGCAATGCAGCATTGGAGCTTATGGCGAGATTTGGATATTGTGATGGTCAACGGATTAACTCTTTGGGGTAACGGTCAATTAGTGCCACTTGGACCTTTAAGAGAGCCTTTGATAGCACTCAGACGAGCAGATGTAGTTGTAATTCATCATGCAGACTTGGTTTCTAATCATGTTCTCAAGGATATTGAGTCAATGGTCCAAGAAATTAAAAAGTCTGTTCCTATTTTCTTCACAAAAATGGATCCAACTTACTTATTTGAGGTGGGAAACATCAATTCTAAAATACTGTTGAAGGCTCTTCATGAAGCTATTATTTTGTGTGTTTCTGCTCTTGGTTCTGCAGATCCTTTTGTGAAGCGGATTCAAGAGATGGGAGCGTATTATGTTGATCGAATAGATTTCAGTGATCATCACATATTCCATGCCAGGGATATTGGTATGATCAGAGCCAGACTTGGAGAACTGGAGAGAAAGTTTGGTTTCAAACCAATTGTTGTAATAACTGAAAAGGATTACGATAGGGACCCTGAGATTCTTAAACAACTTAATCCATTTAAAACTTTTGTTCTGTGTTCTACATTGAAGATTTTGCCCTATAGAGGAAACAATGAAGAAATCTTCAAGAAATTTCTGAACGACCAACTGAAATTAGAATTTTCTGCAGCAGATTAA 1200 0.3825 MEKLRKVVNEIAYTNNLNKLSPLHLSLLPFLSISSAFYKLALSLRHFLYKHRFFQFQIHHLPVPVISVGNLTWGGNGKTPMVEFIALYFSHCGISPLVLSRGYGGGDEVNMLQRHLLGTPAKFGVGANRAAVANHLIKKYGYIDICKNSLYEKQNLDQKDQNSRDSEKIGVIVLDDAMQHWSLWRDLDIVMVNGLTLWGNGQLVPLGPLREPLIALRRADVVVIHHADLVSNHVLKDIESMVQEIKKSVPIFFTKMDPTYLFEVGNINSKILLKALHEAIILCVSALGSADPFVKRIQEMGAYYVDRIDFSDHHIFHARDIGMIRARLGELERKFGFKPIVVITEKDYDRDPEILKQLNPFKTFVLCSTLKILPYRGNNEEIFKKFLNDQLKLEFSAAD 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01349 399 Pfam Tetraacyldisaccharide-1-P 4'-kinase 29 388 IPR003758 GO:0005524|GO:0009029|GO:0009245
Trre5g01349 399 Hamap Tetraacyldisaccharide 4'-kinase [lpxK]. 7 392 IPR003758 GO:0005524|GO:0009029|GO:0009245
Trre5g01349 399 PANTHER TETRAACYLDISACCHARIDE 4'-KINASE 1 392 IPR003758 GO:0005524|GO:0009029|GO:0009245
Trre5g01349 399 NCBIfam tetraacyldisaccharide 4'-kinase 38 315 IPR003758 GO:0005524|GO:0009029|GO:0009245
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01349 Trre-Chr5 9452141 9456631 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01349 K00912 - gmx:100789612 605.52
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01349 5 9452141 9456631 Trre5g01349 5 9452141 9456631 ECH