Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01228 ATGTACCTCGGGTTAGAACTCGTGTTAGCACTTTGTGCATCACCGGTTCGAACACTATTCGGTTTTGAAATCGAACCACAATTCAATGAACCGTATTTATCCACTTCGCTTCAAGACTTTTGGGGTCATAGGTGGAACCTCATGGTAACCCGTATACTACGCCTTACTATATACAATCCTATTCGTCATGTCATTAACACTAATGTGGGTTCCACGTGGGCCAATTATATTGCCACGTTGGCTACATTTGTTGTGTCTGGTCTTATGCACGAGATTATTTATTATTACCTTACACTTGCATCTCCCACATGGGAAGTCACGTGGTTTTTTGTGCTACATGGTGTGTGTACTTCCGTTGAGGTGGTAGTAAAGAAGATTGTTCTCCGCCGTGGGTGGCGGTTGCACCGAGCTATATCAGGGCCTCTTACGTTGGCGTTTTTGGCTGTTACCGGGAATTGGTTGTTTTTTCCTCAGTTGGAGAGGAATGGTGTTATTAGGAAGGCTATTGGAGAGTATGCAATCATGGTGGATTTTGTCAAAGATAAGTTACCATTACATTTGTTTAGTTAA 570 0.4281 MYLGLELVLALCASPVRTLFGFEIEPQFNEPYLSTSLQDFWGHRWNLMVTRILRLTIYNPIRHVINTNVGSTWANYIATLATFVVSGLMHEIIYYYLTLASPTWEVTWFFVLHGVCTSVEVVVKKIVLRRGWRLHRAISGPLTLAFLAVTGNWLFFPQLERNGVIRKAIGEYAIMVDFVKDKLPLHLFS 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01228 189 PANTHER LONG-CHAIN-ALCOHOL O-FATTY-ACYLTRANSFERASE 3-RELATED 1 182 IPR044851 GO:0006629|GO:0008374
Trre5g01228 189 Pfam Membrane bound O-acyl transferase family 25 111 IPR032805 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01228 Trre-Chr5 8670593 8671162 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01228 1 183 Miscellaneous Gene Families AT5G55330 52.174 2.89e-59 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01228 - - gmx:102667540 289.271
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01228 5 8670593 8671162 Trre5g01228 5 8670593 8671162 ECH