Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01222 ATGTGGCAGTTCATGGCACTCTCTTCTGTATTTTCTCTGCTTTTTCTTCATTGCTCATTGTTTGTAGCATTGGTATCTGGATGTAAAACATTGCAAGGGTTACCACCAGTGGTAATAGCACGAGGAGGATTTTCGGGGATATTTCCAGATTCGAGTTTAGCTTCGTATAGTTTGGCACTAAAAGCTAGTTCACCAAATATCACTCTATGGTGTGATGTGCAACTGACAAAGGATGGAATTGGGATTTGTTTTCCAGACATCAAGTTGGACAATGCGACCGACATTACCATTGTTTATCCTGGCAAAGCTAAGGATTACTCGGTTAATAAGGTTCCAACTCGCGGATGGTTTTCCCTCGATTTCAACTTCAATGAACTATCAAATGTCTCGCTTGTTCAGGGAGTGTATTCTCGAACGAATAAGTTTGATGGAAGTAACTATCACATTTCCACGGTTGAAAACGTAGCTAAATTAGTAAAATCGCCATCAACTGGCCTATGGTTAAATGTTCAGCATGATACATTCTACAAACATCACAATTTGAGTGTAGAGAAATTTCTATTGTCTCTTTCTACTAAAGGAGTATCAATCAATTACATCTCATCGCCTAACGTGGATTTCTTAAGACGAGTAAGATCAAAAACCAGTTTTAAAAAAACCGTTACGATCTTCAGGTTTCTAGAGAAATATAAGATTGAACCTACAACCAACAAGACTTATGGTGCACTCTTGAAAAACCTCAAATTTATCAGAACGTTTGCTTCCGGAATTCTTGTTCCGAAAGGCTATATATGGCCTGTAGACTCACAACTTTATCTGCAGCAACATACCTCTCTTGTCGCGGATGCTCATAAACAAAGGCTGAAAGTTTTTGTTTCAGATCTTGTTAATGATGTTACTTTCAGCTACAATTTCAGTTATGATCCTATGGCTGAATGTTTGTCTTTCATTGACAATGGTAACTTCTCTGTTGATGGTATTCTGTCTGATTTTCCAGTAACTCCAACTGCAGCCATAAATTGCTTTTCTGGTCTAGGAAGAAATGCCAAAAAACAAGTGGAGACTTTGATAATTACAAAATATGGAGCAAGTGGAGACTATCCAGCTTGTACAGATCTTGCATATAAGAAAGCAAAGTCAGATGGAGCAGATGTAATTGATTGTCCTGTTCAAATCTCCAAGGATGGAGTACCCTTTTGCTTAAGTTCTATAGATCTTTCAAAGAGTACAACAGTTTCTGATACGAAATTCAGAAACCGTTCGGCTATTATTCCAGAGATTCAAAATGGCAGTGGCATATATGCATTTAGTTTGACATGGAATGAAATCAAAACATTGACGCCGTCAATATTGAAACCTTTTGAGAAATACCTATTGTTCCGGAATCCGAAATTCAAAAATCAAGGGAAATTTGTTACCTTGTCTGATTTTTTATCCTTAGCTAAAGGATATGGAATCTTGATCAACATAGAGAATGCTGCCTACCTCGCAGAGAAACGGGGACTAAGTGTGACCAAAGCAGTCCTTAATACTCTAAAAAAATCCGGTTATGATGAACAAAGATCTCCTAAAATTATGATTCAATCAACACACAAATCAGTACTAAAGATATTCAAGGATAAATCTAAATATGAAAGGGTTTACAAAGTTGGTGAGAATATTCGCGATGCTGACGACAAAGCTATCGAAGACATAAAAACATTTGCTGATTCTGTTGTGGTACAAAAGGCTTCTGTTTTTACTCAAAGTGAAGCTTTTCTAGTAAACTCTACAAATACTGTAGCAAGGTTGCAATCATTTAAGCTACCAGTTTATGTAGAAACTTTCAGCAACGAATTTGTATCTCAAGCATGGGATTACTACTCAGATGCATTTGTTGAGATAAATTCATTTGTGGTTGGAGCTAAGGTTAATGGCATTATCACTGACTTCCCTAAGACGGCTGTGAGATACACGAAGAACAAGTGCTTAAAGCATAGAAACAAAGCACCTTATATAAGCCCTATTCAACCTGGAAAACTTTTAAAACAAGTTACTGATTTTTATCTTCCACCACCTTCCCCTCAACTCCCAGTTTTACATGATAGTAATGTCACTGAGCCACCTTTGCCAAGTGTTTCTAAAAAACTTCCAATTTTCGGCGCTGCTCGTTGA 2154 0.3733 MWQFMALSSVFSLLFLHCSLFVALVSGCKTLQGLPPVVIARGGFSGIFPDSSLASYSLALKASSPNITLWCDVQLTKDGIGICFPDIKLDNATDITIVYPGKAKDYSVNKVPTRGWFSLDFNFNELSNVSLVQGVYSRTNKFDGSNYHISTVENVAKLVKSPSTGLWLNVQHDTFYKHHNLSVEKFLLSLSTKGVSINYISSPNVDFLRRVRSKTSFKKTVTIFRFLEKYKIEPTTNKTYGALLKNLKFIRTFASGILVPKGYIWPVDSQLYLQQHTSLVADAHKQRLKVFVSDLVNDVTFSYNFSYDPMAECLSFIDNGNFSVDGILSDFPVTPTAAINCFSGLGRNAKKQVETLIITKYGASGDYPACTDLAYKKAKSDGADVIDCPVQISKDGVPFCLSSIDLSKSTTVSDTKFRNRSAIIPEIQNGSGIYAFSLTWNEIKTLTPSILKPFEKYLLFRNPKFKNQGKFVTLSDFLSLAKGYGILINIENAAYLAEKRGLSVTKAVLNTLKKSGYDEQRSPKIMIQSTHKSVLKIFKDKSKYERVYKVGENIRDADDKAIEDIKTFADSVVVQKASVFTQSEAFLVNSTNTVARLQSFKLPVYVETFSNEFVSQAWDYYSDAFVEINSFVVGAKVNGIITDFPKTAVRYTKNKCLKHRNKAPYISPIQPGKLLKQVTDFYLPPPSPQLPVLHDSNVTEPPLPSVSKKLPIFGAAR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01222 717 CDD GDPD_SHV3_repeat_1 36 338 - -
Trre5g01222 717 Pfam Glycerophosphoryl diester phosphodiesterase family 43 292 IPR030395 GO:0006629|GO:0008081
Trre5g01222 717 Pfam Glycerophosphoryl diester phosphodiesterase family 362 647 IPR030395 GO:0006629|GO:0008081
Trre5g01222 717 ProSiteProfiles GP-PDE domain profile. 355 652 IPR030395 GO:0006629|GO:0008081
Trre5g01222 717 PANTHER GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE 26 709 - -
Trre5g01222 717 ProSiteProfiles GP-PDE domain profile. 36 339 IPR030395 GO:0006629|GO:0008081
Trre5g01222 717 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 353 652 - -
Trre5g01222 717 SUPERFAMILY PLC-like phosphodiesterases 356 651 IPR017946 GO:0006629|GO:0008081
Trre5g01222 717 FunFam Glycerophosphodiester phosphodiesterase GDPDL3 34 338 - -
Trre5g01222 717 Gene3D Phosphatidylinositol (PI) phosphodiesterase 354 652 IPR017946 GO:0006629|GO:0008081
Trre5g01222 717 Gene3D Phosphatidylinositol (PI) phosphodiesterase 35 339 IPR017946 GO:0006629|GO:0008081
Trre5g01222 717 CDD GDPD_SHV3_repeat_2 356 651 - -
Trre5g01222 717 SUPERFAMILY PLC-like phosphodiesterases 36 338 IPR017946 GO:0006629|GO:0008081
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01222 Trre-Chr5 8627166 8630761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g01222 30 711 Receptor kinase-like Gene Family AT4G26690 57.580 0.0 813
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01222 - - tpra:123914082 1354.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01222 5 8627166 8630761 Trre5g01222 5 8627166 8630761 ECH