Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01219 ATGAACAAAAAGGTTCAGATCCTGTTGTTTCTCTTCCTCTTAAACTCCTTCTCTCTCTTTCTCTATTTCATCCATCATCACTCTTTTCTCAACCCTTCTTCACCTTCAAAATTTGACCACAAAAACTTCATTCAAAATCCACCTTTTCAACGACCCTTTCAAAAGATACAACAAACCCATATCTCAAAATCATGGCCAATTCTTCCCTCTTACTTACCATGGTCACAAACTTCAAATGACATTCCTTTAAGGTCATGTGAAGGTTATTTTGGAAATGGGTTCACGCGCCGGGTTGATGTTTTTTCCGGTGGCGGTGGTGGTGGTGGTGGAGGTGGGTGGTTTAGGTGTTGGTATAGTGAGACTTTGAGGAGTTCGGTATGTGAAGGTGGGAGAGTGAAGATGGTGGTTGAGAAGATTGGTATGGCAAAGGGTGGTGAGAATTTGGTTGATGTTATTGGGAGAAGTGAAGATGAGGAGTTGCCTTTGTTTGAAAAGGGTGCTTTTGAGATTGATGGTGGTGAAGGGTTTGTGGGTAAAGGGAATAAGATGGTTGTTGATGATGAGTTTTTGGATAGGTATGTTCCTAGAGGTGAGATTATGAGACATACTATGCGTGATTTGATTGGTAAGATGAGGATTGTTGGAAGGAAGGAATTTGATTGTGATCAGTGGATTGAGGAACCAACGCTTCTGGTGACACGGTTTGAATATGCTAATCTTTTTCACACTGTTACAGACTGGTACAGTGCATATGTTTCTTCTAGAGTAACTGGCTTGCCTAATCGACCTCATTTGATCTTTGTAGATGGACACTGTATGGCTCAACTTGAAGAGACATGGAAAGCGTTATTCTCAAGTGTCAGATATGCTAAAAACTTCACTGGAACAGTTTGTTTTCGTCATGCTATTCTCTCACCACTGGGATACGAGACTGCACTGTTTAAAGGGCTAACAGAAGATATATCCTGCGAGGGAACTTCTGCACAAAAATTGTGGCAAAAACCTGATAACCAAAAAACCGCGCGTCTTTCCGAGTTTGGAGAAATGATCAGAGCATCATTTGGACTACCTTTAAACTTAAACCATCCCGGGAAACCAGTCTCCGGAGGACATAATGTCCTCTTTGTTCGTCGAGAAGATTATTTAGCTCATCCACGTCATGGTGGTAAAGTTGAATCGAGACTAAGTAACGAGGCAGAAGTGTTTGAATCCTTGAACAGTTGGGCATCTAATTATAAAGGGTGTAAAATCAACCTTGTCAACGGATTATTTGCACACATGTCTATGAAGGAACAGGTACGAGCAATTCAAGATGCATCAGTGATCATTGGTGCTCATGGTGCTGGTCTTACTCACATAGTATCTGCATTGCCTAAAACTGTGATTCTAGAGATTATTAGCAGCCAGTTCAGGCGTCCACATTTTGCATACATCGCACGGTGGAAAGGTTTGGAGTATCATGCAATTAACCTCGAGGGGTCATATGCCAATACTGAAACTGTGATCAATGCGTTAGTCAGCATAATGAAAAGCCTTCGATGTTAA 1545 0.4155 MNKKVQILLFLFLLNSFSLFLYFIHHHSFLNPSSPSKFDHKNFIQNPPFQRPFQKIQQTHISKSWPILPSYLPWSQTSNDIPLRSCEGYFGNGFTRRVDVFSGGGGGGGGGGWFRCWYSETLRSSVCEGGRVKMVVEKIGMAKGGENLVDVIGRSEDEELPLFEKGAFEIDGGEGFVGKGNKMVVDDEFLDRYVPRGEIMRHTMRDLIGKMRIVGRKEFDCDQWIEEPTLLVTRFEYANLFHTVTDWYSAYVSSRVTGLPNRPHLIFVDGHCMAQLEETWKALFSSVRYAKNFTGTVCFRHAILSPLGYETALFKGLTEDISCEGTSAQKLWQKPDNQKTARLSEFGEMIRASFGLPLNLNHPGKPVSGGHNVLFVRREDYLAHPRHGGKVESRLSNEAEVFESLNSWASNYKGCKINLVNGLFAHMSMKEQVRAIQDASVIIGAHGAGLTHIVSALPKTVILEIISSQFRRPHFAYIARWKGLEYHAINLEGSYANTETVINALVSIMKSLRC 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01219 514 PANTHER GLYCOSYLTRANSFERASE 6 492 IPR007657 GO:0016757
Trre5g01219 514 Pfam Glycosyltransferase 61 327 463 IPR007657 GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01219 Trre-Chr5 8599006 8602684 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01219 K03714 - gmx:100810186 746.503
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01219 5 8599006 8602684 Trre5g01219 5 8599006 8602684 ECH