Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01118 ATGGGTGTGGAAGAACCAGTGACTGAAGTTTCTAAGACTGATTCAAATGGAAGTAGCGTTCCGGTGAAATCGTTAGGTGAAGTTGTTGAGAAGAAAGACTTGGGAACTGATGGAGGGAAAGTCTTGGAGAGTAATGGAGTCAAAGAGGTTGAAGGAAATAATGTAAAAGAAGTTGAAGAAGATAAGAAAGTTGAGAGTGTGGAAGAGGTACAAGAGGATAAGAAAGCTGATATTGTGGAAGAAGTAAAAGAGGATGTGAAAGATGATGTGGTGGGTGAAGTAAAAGAGGATAAAAAAGCTAATGGGGCTGATGAAGTAAAAGAGGATAAGAAAGATGGTGTGGAAGGAGTAAATGATGATAAGAAAGTTGACGTGGTAGAAGAAGTAAAAGAAGATAAGAAAGACGATGGAGTGGAAGAAGTAAAAGAGGATAAGAAAGATGATGTGGTGGAAGAAGTAAACGAGGATAAGAAAGATGATGGGGTGGGAGAAAGAAAAGAGAAGAAAGATGAAGGGGCTGATGGAGTAAAAGAGAAGAAAGATGATGCTGTGGAAGAAGTAAAAGAGGATAAGGAAGTTGATGATGCAGAAGTAAAGGCGGAAAAGAAAGATAATGAAATTGAAGGGGAAGAAGTAAAAGAGGATATGGAAGTTGATAGTCTGAAAGAAGCAGTGGAGGATAAGAAAGATGACATAAAAGAAATAGAAGAGGACGACAAAAATGTTACTGAATCTGAGAATGAGAAAATGGATGTTGATGATGAGGTTAAGGAAACTACAGAAGGTAAAGAAGAAAAGGCAAACATAGAAGGTGAAAAAGAAGCAGACTTGATGGAAGTAGAGGGTGGCGTTGAGGAGAAGGAGGGGGGTGATGAAGAGGAGAAAACTGAAGCAGAGACAGAGGAGAAGGAAGAGGGTGATGAACAGGAGAAATCTGATGCAGAGACGGAGGAGAAGGAAGAGGGTGATGAAAAGGAGAAAACTGAAGCAGAGACAGAGGATGAAGATGGTGAAGATAATATTGAGAAATCAAAAGAAGAAGATAAGGCAGGGGATAGTAAGGGTGAGAAAGGATCAAAAAAGCGTGCGAGAGGGAAGGTTAATGAGGAGAAAGTGAAAGATAAAAGAAATGAACTGAAGCAGCCAGAGCCAAAGACTCCAACTAGTGATCGCCCAGTGCGAGAAAGGAAATCAGTTGAGAGGCTGGTGGCATTAATCGATAAAGATGCGTCCAAAGAATTACACATCGAAAAGGGTAGTGGCACACCTTTAAAAGATATACCCAATGTGGCATTTAAGTTATCTAGAAGGAAGACTGACGATACTCTCAAGTTGCTCCATACAATCCTTTTTGGAAGGAGAGGGAAGGCAGTTCAGGTCAAGAGTAATATATTGAGGTTTTCTGGTTTTGTATGGCATGGCAATGAGGAGAAGCAAATGAATAAAGTAAGAGAAAAGCTGGACAGGTGTAATAAAGAGAAGTTACTGGAATTCTGTGATTTTCTTGACATAACACTTAATAAGTCAACAATAAAAAAGGAAGATATTATTGCTAAGCTGATAGACTTTTTGGTTGCCCCTCATGCAACTACAACTGTGCTACTTGCAGAAAAAGAGTCAAGTAAGAAGCGCAACCGTTCTGGAAAACGAGGTACACCAAGATCTGGGACTAATACTTCAAGAGGTTCTGCAAAGAGGCGGAAGAAAAATGAAGACTCTTCAGGAGTGGAAAAAAAGAGCACAACTGACACAGAAGATGAATCAGAGGGAGAAGAGAAAGATGAAGAAAACGAGGATGAAGCAGAAAATGATATTCCTGAGAAATCTGAAGATGAAACGCCAGAGAAATCTGCAAGGGAAGATAAAAGTGATTCTGGGAGCGAATCTGAAGATGTGAAAACAAAGAAAAAACCCTCTAAAATATCATCTGGAAAAAAAGAGTCCTCTGGAAGAAGCAAAACTGGGAAAACTACAGTCACAAATAAATCTCGCTCACCACGTAAGAGAACACCTAAGAAATCATCAAATACCGGACCAAAGTCTGATGATGACATTGAAGAAAGTCCAAAGGTATTTTCTAGGAAGAAGAAAAATGAGCAAGGGGGAAAGCAGAAGATAACAACTCCAACTCCAACCAAGTCTTCCTCAAAGTCCAAAGAGAAAACTGCAAATGTTACTAAGGGAAAAGGCAAGAAGAAAGAGAAGTCCTCAAGTCCCAGCGACGATCAGTTGCGCAATGCAATATGTGACATTCTTAAAGAAGTCGACTTCAATACGGCCACATTTACTGACATTCTGAAGCTACTTGCTGAACAATTTGATGTGGATCTCACCCCAAAAAAGGCAGCTATTAAGCTCATGATTCAGAAAGAGCTGGAAAAACTAGCTGAAGAAGCAGAGGATTCCGAGGAAGATGAAGAGGATGCCGGAAAAAGTGAAGGCCGAACTACCGGCCAGAAGGCTTAA 2466 0.4023 MGVEEPVTEVSKTDSNGSSVPVKSLGEVVEKKDLGTDGGKVLESNGVKEVEGNNVKEVEEDKKVESVEEVQEDKKADIVEEVKEDVKDDVVGEVKEDKKANGADEVKEDKKDGVEGVNDDKKVDVVEEVKEDKKDDGVEEVKEDKKDDVVEEVNEDKKDDGVGERKEKKDEGADGVKEKKDDAVEEVKEDKEVDDAEVKAEKKDNEIEGEEVKEDMEVDSLKEAVEDKKDDIKEIEEDDKNVTESENEKMDVDDEVKETTEGKEEKANIEGEKEADLMEVEGGVEEKEGGDEEEKTEAETEEKEEGDEQEKSDAETEEKEEGDEKEKTEAETEDEDGEDNIEKSKEEDKAGDSKGEKGSKKRARGKVNEEKVKDKRNELKQPEPKTPTSDRPVRERKSVERLVALIDKDASKELHIEKGSGTPLKDIPNVAFKLSRRKTDDTLKLLHTILFGRRGKAVQVKSNILRFSGFVWHGNEEKQMNKVREKLDRCNKEKLLEFCDFLDITLNKSTIKKEDIIAKLIDFLVAPHATTTVLLAEKESSKKRNRSGKRGTPRSGTNTSRGSAKRRKKNEDSSGVEKKSTTDTEDESEGEEKDEENEDEAENDIPEKSEDETPEKSAREDKSDSGSESEDVKTKKKPSKISSGKKESSGRSKTGKTTVTNKSRSPRKRTPKKSSNTGPKSDDDIEESPKVFSRKKKNEQGGKQKITTPTPTKSSSKSKEKTANVTKGKGKKKEKSSSPSDDQLRNAICDILKEVDFNTATFTDILKLLAEQFDVDLTPKKAAIKLMIQKELEKLAEEAEDSEEDEEDAGKSEGRTTGQKA 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01118 821 MobiDBLite consensus disorder prediction 1 74 - -
Trre5g01118 821 SUPERFAMILY DEK C-terminal domain 733 792 - -
Trre5g01118 821 Coils Coil 218 238 - -
Trre5g01118 821 ProSiteProfiles DEK C-terminal (DEK-C) domain profile. 738 793 IPR014876 -
Trre5g01118 821 MobiDBLite consensus disorder prediction 675 702 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 564 586 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 795 821 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 342 396 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 609 652 - -
Trre5g01118 821 PANTHER DEK PROTEIN 285 809 IPR044198 GO:0003677|GO:0006325
Trre5g01118 821 Coils Coil 311 347 - -
Trre5g01118 821 FunFam DEK domain-containing chromatin associated protein 729 794 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 285 320 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 327 341 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 87 284 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 50 74 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 536 744 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 720 740 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 587 608 - -
Trre5g01118 821 Coils Coil 473 493 - -
Trre5g01118 821 MobiDBLite consensus disorder prediction 87 396 - -
Trre5g01118 821 Gene3D - 729 794 - -
Trre5g01118 821 Pfam DEK C terminal domain 739 792 IPR014876 -
Trre5g01118 821 MobiDBLite consensus disorder prediction 703 719 - -
Trre5g01118 821 Coils Coil 785 812 - -
Trre5g01118 821 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01118 Trre-Chr5 7877595 7886213 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01118 K17046 - gmx:100818537 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01118 5 7877595 7886213 Trre5g01118 5 7877595 7886213 ECH