Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01103 ATGAAGGTGGGGCCACACAATGTTGCTATTGCATTTTCAATCTTATTATTATCAAACATTAATGCTGTTTTTGGGATTAGATTTGTGATTGATAGAGAAGAATGTTTCTCTCATAATGTTCAATATGAAGGGGATACAGTTCATGCTTCATTTGTTGTGATTAGCACTACTGAATCAACTTGGCCATTAACTCAAGAAGGTTTAGACGTTACGGTTAAAGGACCTTCTGGTGATCAAGTTCGAGATTTTCGTGGTAAGGTAAGCGAGAAATTCGATTTTGTAGCTCGAACTAGAGGACCCTATCGTTTCTGCTTCACTAACAAGTCACCTTATCGCGAAAAAATTGACTTCGATGTTCATTCTAACCATTTTTCAACCTTTGATCAACATGCACAAGATGAGCATTTTACTCCTTTAATAGACCAAATAATAAAGTTAGAGGAAGCTCTTTTCAACATTCAGTATGAACAACATTGGCTTGAGGCTCAAACAGAACGTCAAGCAACAGTAAATAATGCAATGAGTTCGAGGGCAATTCACAAGGCCTTACTTGAATCCGCAGCACTAATTGGTGCAAGCACTCTCCAAGTTTATCTTCTTCGCCGCCTCTTTGAGAGAAAGCTTGGTTTGTAG 633 0.3823 MKVGPHNVAIAFSILLLSNINAVFGIRFVIDREECFSHNVQYEGDTVHASFVVISTTESTWPLTQEGLDVTVKGPSGDQVRDFRGKVSEKFDFVARTRGPYRFCFTNKSPYREKIDFDVHSNHFSTFDQHAQDEHFTPLIDQIIKLEEALFNIQYEQHWLEAQTERQATVNNAMSSRAIHKALLESAALIGASTLQVYLLRRLFERKLGL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01103 210 ProSiteProfiles GOLD domain profile. 33 121 IPR009038 -
Trre5g01103 210 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 12 208 IPR015720 -
Trre5g01103 210 SMART EMP24_GP25L_2 25 205 IPR009038 -
Trre5g01103 210 Pfam emp24/gp25L/p24 family/GOLD 32 205 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01103 Trre-Chr5 7747374 7749571 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01103 - - twl:119988318 304.293
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01103 5 7747374 7749571 Trre5g01103 5 7747374 7749571 ECH