Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g01040 ATGCATCTCTACAATGCATGGTTGCCGCCACCTGTGGCGGCTCAGACCGCCGGCGAAAGAGATTCTTTCTCACGCATCATCGCAACCGTCAACTCATCCTTCAACCGTGACGATCCCGAATCCGTCTATTCAACTATCAGATACATCTCCGTTCTTGACCTTTTCATAAAGGCGAAAAGTGATGTGTCTTTGGAAGATGTCCGCACCCTTATTCAGATGGGCCTTGAACTATTTCACATGTCCCGTAATAAGCTTTATGCTCAGGTTAGATGGGGAAATTTATTAGTCAGACTACTCAACAAGTATAGGAAAAAAATTGCACTGACTATCGAATGGAGGCCTCTATATGATACACTGATTAGCACACATTTTACCAGAAGTACAGGCCCAGAAGGTTGGAGAGTAAGACAACGGCATTTTGAAACTATAACCTCACTTGTTCAGTCCTGCCGAAGATTCTTCCCATCAGGTGCTGCCTCTGAGATATGGTCTGAGTTTAAATCTTTATTGCAAAATCCATGGCATAATTCATCTTTTGAAGGATCTGGGTTTGCTAGACTGTTTCTCCCAACAAATCTGGACAATCAGGCCTTTTATACACATGACTGGATTACAGAGTGTATAGACTTGTGGGAATCTATCCCAAATTGCCAATTCTGGAACAGTCAGTGGGCAGATGTCATAGCTCGTGTTGTAAAAAATTACCCCGATGTTGATTGGGAGGGATTGTTGCCTTTGCTTTTTGCTAAATACTTAAATATGTTTGAGGTTCCTGTTGCAAATGGAAGTGGATCATATCCCTTTTCACTGGATGTTCCAAGAAACACAAGGTTCTTGTTTTCCAATCGAACTTCCACCCCGGCAAAGGCTATCGCCAAGTCAATTGTTTATATGTTAAAACCTGGTAGTTCTGCGAAACAGCACTTTGAGAAATTGGTCAACATTTTGGAACAATATTATCATCCCTCAAATGGTGGTCGATGGACTTACTCACTGGAGAGGTTTTTGTATCATTTGGTGATTCAATTTCAGAAGCGTCTACAGAATGAACAGTTGGGAATAAATAATTGCAGACCCACTGAACAGCATTTTGGAGAATCAGAGAGGGTCTTCTTTGTTAATACAATGCTAAAGTTAATCGACCGTGGTCAATACAGCAAGAATGAGCATCTCTCTGAAACAGTTGCTGCAGCTACTTCTATATTGTCTTATGTGGAACCATCATTAGTCCTTCCATTTGTAGCATCTCGGTTTCAAATGGCCCTTGAGACGATGACTGCCACCCACCAGCTGAAAATTGCAGTTATGTCAGTGGCATTTGTTGGGCGTTCGCTATTTTATACATCTGTATCAGCTTCCTCCATGAAACAAGTGGATGTTGGTGGTGGTGATGAAGCATTCATTGATCTTGTGGGGGTTTCATTATCCAATGCATTACTTGGCATGGATGCCAACGACCCTCCGAAAACTTTAGCTACCATGCAGTTAATCGGTTCCATATTTTCAAATTTGGCTTTATTGGATGATAAAATTGATGACTTATCATTTATGCCAATGATCCGCTTTTCTGAGTGGCTGGATGAATTCTTATGCCGTCTGTTTTCCCTACTTCTACACCTAGAACCCAGCAGTGTTTTAAATGAAGGTCTGCAGTCATCAGCTTCTTCAGGAACTTTTCTAGTTGATGATGGTCCATACTACTTCTGTGTTCTTGAAATTCTTCTTGGGAGGCTTTCAAAATCGCTATATAATCAGGCTTTGAAGAAAATTTCCAAGTTTGTGAGAACAAACATTCTTCCTGGTGCTATTGCAGAGGTTGGACTGCTCTGTTGTGCGTGTGTTCACTCGAACCCGGAAGAAGCAGTCAGTCAACTTGTTGAGCCAATATTAGTGTCTGTGATATCCTCTTTGAAAGGAACACCAGGGACTGGATTTGGAGGAGGTGGAACTTTTGATACTTCTGCTTCAACCAAGGTTAGGTCCTCAATTTCACCTGCTCTTGAGGCTGCAATTGACTATCAACTAAAGATATTATCAGTTGGTATCACATATGGAGGTCCGGCACTCCTCCGCTACAAGGATCAATTAAAAGAAGTTATCTTCTTGGCCTTTGACTCACCATCTTGGAAGGTTAATGGTGCTGCTGATCATCTTCTTCGGTCCCTTCTTGGAAGTCAGATTCACTATTATCCAATAGACCAATATAAGTGTATTCTTAGTCACCCTGATGCTGTTGCTCTAGAAGAGTGGATTAGCACGAAAGATTTTTCGACTGATGAAAGGTTGATTCCAAAGTGGCATATTCCTTGTGATGAAGAAATTCATTTTGCAAACGAGCTTTTAGATATTCACTTTAAGTCTGCTTTGGATGATCTTTTGAGAATATGCCAGAGTAAAATTCATGCTGATCAAGGAGATGAGAAAGAGCACTTGAAAGTGACTCTTTTACGCATTGAGTCGTCATTGCAAGGGCTTTTTTCTTGCTTGCCTGATTTTGTTCCAGCCTCTAAGAATGGAACGGTTGAAGATCCCAAACATACATTTCTAATTGCTGGGGCTACAGGATGTACTGTTGGAACTACTGCTTTGAGAGAAAAAGCAACTGAGATTGTACATGCAGCCTGCAAATATGTCGTTGAGAATAAATCTGATGACAGTATCTTGTTGATACTCGTCATACGTATTATTGACGCTTTGGGAAATTATGGAAGTTTGGAATATGATGAGTGGTCTAGTCACAGACAGGCTTGGAAGTTGGAATCTGCTGCCATAATAGAACCGCCAATTAATTTTATTGTGTCATCTCATTCTAAAGGAAAGAAAAGACCTAGGTGGGCTCTTATCGACAAGGCATTCATGCACAATACCTGGAGGTCTTCACAGGCATCCTATCATCTTTACCGTACAAGTGGGAATTACTGTCCATCTGAACACGTGACTATTTTGATGGATGATTTGTTGAGTCTTGCTGTGCATAGCTATGAAACTGTTCGCCTGCTTGCAGGGAAAGCTCTAGTGAAGCTGATCAAGAGATGGCCATCTATGATTTCAAAATGTGTCATCACTCTTACTAGTAACTTACAGGACCCCAACGCCAAGGAGTATGCAGTCTTGGGTTCTTGTTCAGTCCTTGCCTCACAAACAGTTCTCAAGCATTTGACTACGGATCAAAAGTCATTCTCTTCGTTTATCTTGTCAATTCTTTCAAGTTCTCATCATGAATCCTTGAAATCCCAGAAAGCAATTAATGAGCTTTTTGTGAAATACAACATCCAATTTTCTGGAGTATCTAGAAGCTTTTTCAAGATATCAGACAAAGAAAATCATACTGGTGAACTTGGTTTTTCTGATTTGGTTGCTCAGATTGGTTCTTTGAGTTTTGATTCTACTGGCTTGCATTGGCGGTATAATTTGATGGCTAACAGAGTTCTTCTCCTGCTGGCTTTGGCGTCTCGGAGCCATCCAAATTCATCATCTAAAATCCTGAGTGAAGCTGCTGGACACTTCTTGAAGAATTTGAAAAGTCAACTTCCTCAGACAAGGATACTTGCTATTTCGGCTCTGAATACATTGTTAAAGGAATCGCCTTATAAGCTGTCTCCTGGTGAGAAATCTGATGTAGTCGAGGATTTGAAAAGCCATGTCAAGTCATCCCTTGAAGGAACTTTAACCCAAACTTTTCAGGAAGATGGTTTCTTCAATGACACACTCACTAGTCTTTCTCATGTTCATATAATAACTGATAACGAATCTGCTTCTAGAGGAAATCATGGAGATTCCAGTATTCAAAGCTTAGCAGACAAATCCATAACCCGTTTTTATTTTGAATTTTCGGCTTCATGGCCACGCACACCAAGTTGGATCTCCTTTTTAGGAAGTGATACATTCTACTCAAGTTTTGCTCGTATTTTCAAGCGGTTAGTACAAGAATGTGGCATGCCTGTAGTGTTGGCTCTTAAAGGTGCAGTAGATGAGTTTACAATTGCCAAGGAGAGATCTAAACAATGTGTAGCTGCTGAAGCATTGGCAGGTGTATTACATTCTGATATTGACGGGCTATCAGGAGAATGGGAGAGCTGGCTGATGCCCCAGTTGAAGAATATAATTTTAGCACCATCTGTTGAATCAGTTCCTGAGTGGTCTTCTTGCATAAGATATGCAGTTACTGGTAAAGGAAAGTATGGAACACGAGTTCCACTTTTGAGGCAGAAAATTCTGGATTCCTTGATGACACCATTACCTCCAACAGTAGCTACCACCGTAACATCCAAGCGATATGCTTTTCTAGCCGCTTCACTTATAGAAATATCCCCACAGAAAATGCCAGTAGCTGAAATCCAGCTCCACAATACACTTCTAAAGGAAGTACTTGGTAATATGTGCCACTCATCAGCCCAAGTGAGGGAGGCTCTAGGGGTTACCCTTTCTGTATTGTGCTCTAACATTCGGCTATATCATTCAAGTCATCGTGATAATGTGGGTGATGAGAAAACCAATGATGTTGATGATTTGATGAAAGATGAAAGCTGGGTGCAGTATCTTACAGAGAGAGCAGCTGAAGCAGTTGTGAACATTCAGATTGCTTCCCAATCAGACAAAGCCGTGAATCCAATAGAGACAAGTTCTCAAAATGGGCATTTAGATGGGGATTCACAAGATGATATGAAATGGATGGAAACGCTACTCTACTTCATCATCTCGTCATTGAAGTCTGGGAGATCATCTTATCTGCGTGATGTGATTGTGGGGCTTCTTTATCCTGTGATTTCCTTGCAGGACACATCGAATAAGGATTTGTCAACATTAGCCAAGGCAGCATTTGAATTATTAAAATGGATGATTGTTTGGGAACCTCACCTCCAGAAGGCCATAGACGTGATTCTTTCTTCTGCCAATGATTCCAACTGGCGAACTAGATCTGCTACATTGACATATCTGCGTACTTTCATGTACAGGCACACTTTCATTCTCTCAAGTTCAAAAAAACAAGAAATTTGGAGAACAGTCGAGAAGTTACTAGTAGACAACCAAGTTGAGGTAAGAGAACATGCTGCGGCAGTTTTAGCAGGCTTAATGAAGGGTGGAGATGAAGATCTAGCAAAAGATTTCCGCAATCGAGCTTATGTTGAGGCAAATATTGTACAAAAGAGAAGAAAATCGAGAAAAGCAAGCTCTGGTTCATCTGTCGCATCTGTTCATGGTGCTGTACTAGCTTTGGTAGCTTCTGTATTATCAGCCCCATATGACATGCCCAGTTGGTTGCCTGAGCATGTTACACTACTAGCTCGATTTAGCGGGGAGCCATCCCCTGTGAAATCTACTGTTACAAAAGCTGTTGCAGAATTCCGGCGGACCCATGCTGATACATGGAATGTTCAGAAAGAGTTATTCACTGAAGAGCAACTTGAGATTCTGGCAGATACATCCTCTTCATCATCGTATTTTGCATGA 5451 0.4124 MHLYNAWLPPPVAAQTAGERDSFSRIIATVNSSFNRDDPESVYSTIRYISVLDLFIKAKSDVSLEDVRTLIQMGLELFHMSRNKLYAQVRWGNLLVRLLNKYRKKIALTIEWRPLYDTLISTHFTRSTGPEGWRVRQRHFETITSLVQSCRRFFPSGAASEIWSEFKSLLQNPWHNSSFEGSGFARLFLPTNLDNQAFYTHDWITECIDLWESIPNCQFWNSQWADVIARVVKNYPDVDWEGLLPLLFAKYLNMFEVPVANGSGSYPFSLDVPRNTRFLFSNRTSTPAKAIAKSIVYMLKPGSSAKQHFEKLVNILEQYYHPSNGGRWTYSLERFLYHLVIQFQKRLQNEQLGINNCRPTEQHFGESERVFFVNTMLKLIDRGQYSKNEHLSETVAAATSILSYVEPSLVLPFVASRFQMALETMTATHQLKIAVMSVAFVGRSLFYTSVSASSMKQVDVGGGDEAFIDLVGVSLSNALLGMDANDPPKTLATMQLIGSIFSNLALLDDKIDDLSFMPMIRFSEWLDEFLCRLFSLLLHLEPSSVLNEGLQSSASSGTFLVDDGPYYFCVLEILLGRLSKSLYNQALKKISKFVRTNILPGAIAEVGLLCCACVHSNPEEAVSQLVEPILVSVISSLKGTPGTGFGGGGTFDTSASTKVRSSISPALEAAIDYQLKILSVGITYGGPALLRYKDQLKEVIFLAFDSPSWKVNGAADHLLRSLLGSQIHYYPIDQYKCILSHPDAVALEEWISTKDFSTDERLIPKWHIPCDEEIHFANELLDIHFKSALDDLLRICQSKIHADQGDEKEHLKVTLLRIESSLQGLFSCLPDFVPASKNGTVEDPKHTFLIAGATGCTVGTTALREKATEIVHAACKYVVENKSDDSILLILVIRIIDALGNYGSLEYDEWSSHRQAWKLESAAIIEPPINFIVSSHSKGKKRPRWALIDKAFMHNTWRSSQASYHLYRTSGNYCPSEHVTILMDDLLSLAVHSYETVRLLAGKALVKLIKRWPSMISKCVITLTSNLQDPNAKEYAVLGSCSVLASQTVLKHLTTDQKSFSSFILSILSSSHHESLKSQKAINELFVKYNIQFSGVSRSFFKISDKENHTGELGFSDLVAQIGSLSFDSTGLHWRYNLMANRVLLLLALASRSHPNSSSKILSEAAGHFLKNLKSQLPQTRILAISALNTLLKESPYKLSPGEKSDVVEDLKSHVKSSLEGTLTQTFQEDGFFNDTLTSLSHVHIITDNESASRGNHGDSSIQSLADKSITRFYFEFSASWPRTPSWISFLGSDTFYSSFARIFKRLVQECGMPVVLALKGAVDEFTIAKERSKQCVAAEALAGVLHSDIDGLSGEWESWLMPQLKNIILAPSVESVPEWSSCIRYAVTGKGKYGTRVPLLRQKILDSLMTPLPPTVATTVTSKRYAFLAASLIEISPQKMPVAEIQLHNTLLKEVLGNMCHSSAQVREALGVTLSVLCSNIRLYHSSHRDNVGDEKTNDVDDLMKDESWVQYLTERAAEAVVNIQIASQSDKAVNPIETSSQNGHLDGDSQDDMKWMETLLYFIISSLKSGRSSYLRDVIVGLLYPVISLQDTSNKDLSTLAKAAFELLKWMIVWEPHLQKAIDVILSSANDSNWRTRSATLTYLRTFMYRHTFILSSSKKQEIWRTVEKLLVDNQVEVREHAAAVLAGLMKGGDEDLAKDFRNRAYVEANIVQKRRKSRKASSGSSVASVHGAVLALVASVLSAPYDMPSWLPEHVTLLARFSGEPSPVKSTVTKAVAEFRRTHADTWNVQKELFTEEQLEILADTSSSSSYFA 1816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g01040 1816 SUPERFAMILY ARM repeat 885 1698 IPR016024 -
Trre5g01040 1816 Pfam Proteasome-substrate-size regulator, mid region 310 506 IPR032430 -
Trre5g01040 1816 Pfam Proteasome-substrate-size regulator, mid region 520 825 IPR032430 -
Trre5g01040 1816 Gene3D - 964 1219 IPR011989 -
Trre5g01040 1816 Gene3D - 1400 1747 IPR011989 -
Trre5g01040 1816 Pfam Domain of unknown function (DUF3437) 1731 1816 IPR021843 -
Trre5g01040 1816 PANTHER PROTEASOME ACTIVATOR COMPLEX SUBUNIT 4 2 1816 IPR035309 GO:0016504|GO:0070577|GO:0070628
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g01040 Trre-Chr5 7229732 7246168 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g01040 K06699 - gmx:100814812 3224.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g01040 5 7229732 7246168 Trre5g01040 5 7229732 7246168 ECH