Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00763 ATGATGACAGAGAGAATTCACCCTGATAATGAGTTGGAGGCACAAACAAAACCAACAATTCCTTTGTATCCTCGAAACACTTCAAAATCCGATAGACGTGATCCTTTGCAACACAAGTATTTCAATCCACCTATTCCTAAACGCCCTTTTCCAGTGAGGCATTCCTATGATCCACCAAAGAAGAAAAGAAGAAGTTGCTTCTGCAGGTTCCTGTGTTGTACCATCAGCATATTGTTGATTCTTATAATTGCAATTTCCATCTCCATTGGAACACTCTACCTTGCTTTTAGGCCAAAACTTCCCAAATATTCAGTTGACAGACTCAGAATAACACAGTTCAATCTTACTGATAACAACAATCTTTTTGTTACGTTCGATGTGACAGTAACTGCTAGAAACCCAAATAAGAAGATTGGAATATACTATGTAAATGGAAGCCATATAAGTGCTTGGTATAAAGAAACAGAACTGTGTGAAGGTTCTTTGCCGATATTCTATCAAGGTCATCGGAATACAACCGTACTTAATCTGCCATTAACAGGTCAAACACAGGATGCAACTGGTTTAGTAAATACGTTGCAGCAGCAGATCGAAGAAGCGGGTAATATCCCCCTTGATATTAAGGTTAATCAGAGTGTGAGAATTAAGCTTGGGATGAAGGAGTAG 666 0.3874 MMTERIHPDNELEAQTKPTIPLYPRNTSKSDRRDPLQHKYFNPPIPKRPFPVRHSYDPPKKKRRSCFCRFLCCTISILLILIIAISISIGTLYLAFRPKLPKYSVDRLRITQFNLTDNNNLFVTFDVTVTARNPNKKIGIYYVNGSHISAWYKETELCEGSLPIFYQGHRNTTVLNLPLTGQTQDATGLVNTLQQQIEEAGNIPLDIKVNQSVRIKLGMKE 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00763 221 MobiDBLite consensus disorder prediction 1 61 - -
Trre5g00763 221 Pfam Late embryogenesis abundant protein 128 216 IPR004864 -
Trre5g00763 221 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 26 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00763 Trre-Chr5 5238067 5239052 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00763 53 218 EF-hand Containing Proteins AT5G21130 27.108 1.74e-20 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00763 - - gmx:100781699 262.307
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre5g00763 5 5238067 5239052 Trre5g00763 5 5238067 5239052 ECH