Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00712 ATGGAGAGAGCAAACACTAAATCTTCTTTGAAGTTTGTCAAGAACACTTCACCTTCTTCATCTCAATGGAGTAGTACTGATTCTAAAGGAATGACAAAAGATGTACTCAAAGACAAGTTTTATGACAAGACTAAGGCTTCAAGAAAATCTCCTACAAAAGAAAATACTAAACCACAAGAATTCAAACTCCACACACAAGAAAGAGCTGTTAAACGTGCAATATTCAACTATGAAGTGACAACAAAATTATATCTCATGGAGTTGAAAAAGAGACAAGAAGAGAAGTTGATGAAGATGATTGAAGAGGAAGAGATACGTTTGCTAAGGAAGGAAATGGTTCCAAGAGCTCAATTGATGCCTTATTTTGATAAGCCATTTTCCCCACAAAGATCAAGCAGAACAGTTCCAAGAGAATCATGCATTCACATGATGAGTAGCAAATGTTGGAGCTGCACCTCTGGCAATGGATTTTACAACATGCACCAATGTGGTCACCAAGCTCTTAACAACCCCATTAAATAG 522 0.3697 MERANTKSSLKFVKNTSPSSSQWSSTDSKGMTKDVLKDKFYDKTKASRKSPTKENTKPQEFKLHTQERAVKRAIFNYEVTTKLYLMELKKRQEEKLMKMIEEEEIRLLRKEMVPRAQLMPYFDKPFSPQRSSRTVPRESCIHMMSSKCWSCTSGNGFYNMHQCGHQALNNPIK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00712 173 Coils Coil 86 106 - -
Trre5g00712 173 MobiDBLite consensus disorder prediction 1 61 - -
Trre5g00712 173 Pfam Targeting protein for Xklp2 (TPX2) domain 61 133 IPR027329 -
Trre5g00712 173 MobiDBLite consensus disorder prediction 8 30 - -
Trre5g00712 173 MobiDBLite consensus disorder prediction 31 61 - -
Trre5g00712 173 PANTHER TARGETING PROTEIN FOR XKLP2 41 145 IPR009675 GO:0005819|GO:0005874|GO:0032147|GO:0060236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00712 Trre-Chr5 4867514 4870264 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00712 - - gmx:100305850 248.825