Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00685 ATGTATGATGATGGCTTTGCCTTTAAAACAAAACATGATAGAATGTCTCCTATTTCTTTCATGTCACCGTTGGGAAAAGGAGTGGTGCTAATAATACTGATTCATATATCTAAAGTTGTAAAATTCTACCAGCGCATCTCATTCGATAAGAATCTTGAAATGGAAGCTGAAACAGTGGTGCATACAGGAGGCTGTCATTGTAAGAGTGTAAAGTGGAGGGTGCTTGCTCCTTCTAGTGTTGTAGTATGGGACTGCAACTGCTCAAACTGCTACATGAGAGCTAATGCTCACTTTATTGTACCTGCCGACAAATTTGAGCTTTTGGGAAATTCTGCTGAGTTTCTTACAACTTACACTTATGGCTCTCACACTGCAAAGCACACATTCTGTAAAATATGTGGCATAACTTCATTCTATTATCCACGCTCAAACCCGGATGGGGTTGCAGTTTCATTCAGGTGTGTCGATTCTGGAACGTTGACACACGTTGAAATCAAGCATTTTGATGGGAAGAATTGGGAACGCTCATACAATGAGTCGGGCATTTCTTCATGTTCAAAGGAGTAG 567 0.4056 MYDDGFAFKTKHDRMSPISFMSPLGKGVVLIILIHISKVVKFYQRISFDKNLEMEAETVVHTGGCHCKSVKWRVLAPSSVVVWDCNCSNCYMRANAHFIVPADKFELLGNSAEFLTTYTYGSHTAKHTFCKICGITSFYYPRSNPDGVAVSFRCVDSGTLTHVEIKHFDGKNWERSYNESGISSCSKE 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00685 188 PANTHER CENTROMERE PROTEIN V 53 188 - -
Trre5g00685 188 SUPERFAMILY Mss4-like 54 168 IPR011057 -
Trre5g00685 188 Pfam Glutathione-dependent formaldehyde-activating enzyme 85 167 IPR006913 GO:0016846
Trre5g00685 188 Gene3D - 62 177 - -
Trre5g00685 188 ProSiteProfiles CENP-V/GFA domain profile. 61 174 IPR006913 GO:0016846
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00685 Trre-Chr5 4680346 4683931 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00685 - - gmx:100782041 250.751