Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00676 ATGGTTGCTTTGGTTTCACAAGAAAATGCTGTGACATTGGTTTCTCGTACTGGTAGAGAGTTACAACGTTATAGAAAAGGTCGTCGTCAAGTTGTTGGATGTATACCATATAGATTTAAGATTGGGGAGAAAAATTCTTTAGATGTTTCAGATGAATTGGAAGTTCTTGTTATAAGTTCTCAAAAAGGGAAAGGGATGCTATTTCCAAAGGGAGGTTGGGAATTAGATGAATCTCAAAAGGAAGCAGCTTTGAGAGAAACCATAGAGGAAGCTGGTGTGCGTGGCATTGTTGAGGGTAAATTGGGTAAATGGAGCTTCAAGAGTAAGACATATGATACTTTATATGATGGTTACATGTTCCCTCTACTTGTTCAAGAGCAATTGGAGTTTTGGCCTGAACAAAACCTTCGTCAAAGAACATGGATGAGCATAAAAGAGGCAAGAGATGTTTGTCAACACTGGTGGATGAAAGAGGCTTTGGATAGACTAGTAAACCGTTTGATGGGTCAAAAACTTGGTCGTGAAAACCAAATTCTTCGTTCTCTAAATTGCATTGGAGATGCCAAATCTGACTTGTTAATAGTGTAA 588 0.3844 MVALVSQENAVTLVSRTGRELQRYRKGRRQVVGCIPYRFKIGEKNSLDVSDELEVLVISSQKGKGMLFPKGGWELDESQKEAALRETIEEAGVRGIVEGKLGKWSFKSKTYDTLYDGYMFPLLVQEQLEFWPEQNLRQRTWMSIKEARDVCQHWWMKEALDRLVNRLMGQKLGRENQILRSLNCIGDAKSDLLIV 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00676 195 ProSitePatterns Nudix box signature. 71 92 IPR020084 GO:0016787
Trre5g00676 195 ProSiteProfiles Nudix hydrolase domain profile. 27 164 IPR000086 -
Trre5g00676 195 Pfam NUDIX domain 54 161 IPR000086 -
Trre5g00676 195 Gene3D Nucleoside Triphosphate Pyrophosphohydrolase 13 166 - -
Trre5g00676 195 PANTHER DIPHOSPHOINOSITOL POLYPHOSPHATE PHOSPHOHYDROLASE 14 168 - -
Trre5g00676 195 CDD Nudix_Hydrolase_9 30 157 IPR047198 GO:0016462
Trre5g00676 195 SUPERFAMILY Nudix 19 166 IPR015797 -
Trre5g00676 195 FunFam Nudix hydrolase 17, mitochondrial 14 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00676 Trre-Chr5 4580266 4582367 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00676 K07766 - tpra:123917076 390.193