Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre5g00675 ATGTCCAAAACAAAAACACTTCTCTCCCTCATAATCTTCTCAACTTTCATTCTCCATTCTCTTTCCATCTCCACAGACACATTCCTCTATGGAGGGTGCACACAACAAACATACACCCAAAACTCACCCTACGAATCCAACCTCAACTCACTCCTCACTTCTCTAATCAACTCAGCAACCTACACATCCTACGACAACTTCACAATCATTGCCTCAAATCCCACCGACATCGTTTACGGCCTCTACCAATGTCGTGGTGATATCTCCATGCCAGACTGCTCCTCTTGCATTGCACACGCCGTCTCACGTGCCAGAGACATTTGTCCAGGTGCGTGCGGCGGCATAGTGCAACTAGAAGAATGCTATGTGAAATATGATAATGTTAAGTTTTTGGGTGTGGAGGATAAAACAATTGTGTTGAAGAAATGTGGACCCTATGTTGGGTATGATACGGGTACCCGAGATGCAGTTTTGGCCGGGTTGATGGGTTCGGGTGGTGGGTATTTTCGGGTTGGTGGGTCGGGTCAGTTGAAGGGAATGGCGCAGTGTATTGGTGATTTGAGTTTTGTGGAGTGTGAGGATTGTGTTTCGGAAGCGATCCGACGGTTGAGAAGTGATTGTCCTGCCGCGGATTATGGTGATATGTTTTTGGGGAAGTGTTATGCTAGATACTCTACTGGTGGTGGTGGGGCCCATTCTTACTCCAAGGCCCATGGCAAATCGGACAACAATGGTGAGAAGACATTTGCCATAATTATTGGGTTATTAGCAGGTGTAGCCATACTTATTATTTTCCTAGCTTTTTTAAGAAGGATTTGTGAGGGACAAGGTAAATAA 837 0.4564 MSKTKTLLSLIIFSTFILHSLSISTDTFLYGGCTQQTYTQNSPYESNLNSLLTSLINSATYTSYDNFTIIASNPTDIVYGLYQCRGDISMPDCSSCIAHAVSRARDICPGACGGIVQLEECYVKYDNVKFLGVEDKTIVLKKCGPYVGYDTGTRDAVLAGLMGSGGGYFRVGGSGQLKGMAQCIGDLSFVECEDCVSEAIRRLRSDCPAADYGDMFLGKCYARYSTGGGGAHSYSKAHGKSDNNGEKTFAIIIGLLAGVAILIIFLAFLRRICEGQGK 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre5g00675 278 Gene3D - 156 227 IPR038408 -
Trre5g00675 278 Gene3D - 25 130 IPR038408 -
Trre5g00675 278 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 7 273 - -
Trre5g00675 278 FunFam cysteine-rich repeat secretory protein 3 25 130 - -
Trre5g00675 278 ProSiteProfiles Gnk2-homologous domain profile. 26 130 IPR002902 -
Trre5g00675 278 ProSiteProfiles Gnk2-homologous domain profile. 131 229 IPR002902 -
Trre5g00675 278 Pfam Salt stress response/antifungal 174 226 IPR002902 -
Trre5g00675 278 Pfam Salt stress response/antifungal 33 127 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre5g00675 Trre-Chr5 4568407 4572258 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre5g00675 9 225 Receptor kinase-like Gene Family AT4G05200 27.311 3.94e-21 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre5g00675 - - gmx:100811615 374.4